Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    24   0.82 
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    24   0.82 
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    24   0.82 
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    24   0.82 
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    24   0.82 
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    24   0.82 
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    24   0.82 
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    24   0.82 
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    24   0.82 
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    24   0.82 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   7.7  

>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 79  PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 312 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 359


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 514 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 371
           P I+   NS+     +N  YN   K N       I+  ++I IP+ ++
Sbjct: 312 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 359


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 410 TYAQKNCYTTYTILSLSSI*PYFCEL 333
           T+AQ   + T TI       P+ CEL
Sbjct: 216 TFAQNGPFNTTTIFVPVKPCPWICEL 241


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 364 LVQFNLIFANC 332
           L+ FNL+F NC
Sbjct: 146 LLNFNLLFFNC 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,106
Number of Sequences: 438
Number of extensions: 2764
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)