Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       31   0.006
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   2.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   5.0  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   6.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.7  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 31.1 bits (67), Expect = 0.006
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +3

Query: 330 IPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQ-PDGSIR 506
           +P   E S  ++D+     +  Y VE  +   ++ +  T DG +V GEY ++   DGS+R
Sbjct: 177 LPSKEEVSKKIDDNQ----KVGYVVEGRNYRKYRVEERTSDGFIV-GEYGVVSHDDGSLR 231

Query: 507 KVEYT 521
            V YT
Sbjct: 232 GVRYT 236


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 493 SGWSREYSPFTTSPSRVSCWDL 428
           S WS   +P T     ++CW L
Sbjct: 305 STWSTVQTPTTVMSPTINCWSL 326


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -2

Query: 319 CTTGACCTGLKCWTTGEACIYEECSTG 239
           CT     +G+ C T  E C    C  G
Sbjct: 9   CTCPLGFSGINCQTNDEDCTETSCMNG 35


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 355 IMSKIMLPRSMSSHIPSRIPTPAITSPNTKP 447
           ++S   LP + S+   + + T   T P+TKP
Sbjct: 155 VISSTPLPPTTSTTTRTTLTTKFTTKPSTKP 185


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -3

Query: 423 RRCGDPRRNMRTHTSREHDLRHDRS 349
           R+C D R     H   EHD R   S
Sbjct: 249 RQCDDHRDRPPRHFHEEHDTRRASS 273


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 217 PVLLFTPPPWNILRIYMLRQ 276
           P L F PPP   L+ ++  Q
Sbjct: 197 PYLFFVPPPLMFLQDFLSHQ 216


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 217 PVLLFTPPPWNILRIYMLRQ 276
           P L F PPP   L+ ++  Q
Sbjct: 430 PYLFFVPPPLMFLQDFLSHQ 449


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 217 PVLLFTPPPWNILRIYMLRQ 276
           P L F PPP   L+ ++  Q
Sbjct: 430 PYLFFVPPPLMFLQDFLSHQ 449


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 328 RFQLPSNTPIMSKIMLPRSMSSHIPSRIPTPA 423
           R  LP+N       +LP +  ++ P   P P+
Sbjct: 47  RLSLPTNPAFFHPGLLPLAWQANSPPSPPAPS 78


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 288 SVGLLAKHVYTKNVPRG 238
           S   L  +VYT+N+P G
Sbjct: 51  SENCLVLNVYTRNIPDG 67


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 56  LPRWCYR 76
           +PRWCY+
Sbjct: 581 VPRWCYQ 587


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 225 IVHAAPVEHSSYIHASPVVQH 287
           ++H  PV H  + +A  + QH
Sbjct: 193 VLHQCPVCHKKFTNALVLQQH 213


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +3

Query: 297 VQHAPVVHHAAIPIAVEHSDHVEDH 371
           + H+P ++HA  P    H +   +H
Sbjct: 39  LHHSPHLNHAMHPYHANHVNPTANH 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,070
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)