Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302H12f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) 51 7e-07
SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8) 50 9e-07
SB_57270| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 41 7e-04
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 39 0.003
SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6) 38 0.004
SB_29375| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2) 36 0.020
SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 36 0.027
SB_8567| Best HMM Match : EB (HMM E-Value=2.3) 35 0.035
SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_38532| Best HMM Match : CRAM_rpt (HMM E-Value=2.1e-29) 34 0.082
SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_26106| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.53) 33 0.19
SB_41882| Best HMM Match : Amelogenin (HMM E-Value=2) 33 0.19
SB_40708| Best HMM Match : SRCR (HMM E-Value=0) 32 0.25
SB_51596| Best HMM Match : DUF652 (HMM E-Value=8.3) 31 0.44
SB_5401| Best HMM Match : DUF652 (HMM E-Value=3) 31 0.44
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 31 0.58
SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_58551| Best HMM Match : GLTT (HMM E-Value=5.7e-23) 30 1.0
SB_16860| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_6268| Best HMM Match : Extensin_1 (HMM E-Value=0.098) 30 1.0
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 30 1.3
SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031) 30 1.3
SB_28441| Best HMM Match : GLTT (HMM E-Value=3.7e-28) 30 1.3
SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 29 2.3
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 29 2.3
SB_7305| Best HMM Match : Extensin_2 (HMM E-Value=0.043) 29 3.1
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33) 29 3.1
SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06) 29 3.1
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_41288| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_35669| Best HMM Match : CCT (HMM E-Value=9.1) 28 5.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_58339| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_51497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_36300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_4465| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 27 7.1
SB_46011| Best HMM Match : DNA_ligase_ZBD (HMM E-Value=2.9) 27 7.1
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 7.1
SB_11408| Best HMM Match : zf-C2H2 (HMM E-Value=0.072) 27 7.1
SB_621| Best HMM Match : SNF2_N (HMM E-Value=0) 27 7.1
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_34999| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_59101| Best HMM Match : PT (HMM E-Value=0.026) 27 9.4
SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 27 9.4
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 27 9.4
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
Length = 1099
Score = 50.8 bits (116), Expect = 7e-07
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Frame = +3
Query: 90 HAVSSQSIVRHDEP----SHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP--VEH 251
H + I+ H P H H P+L H P++ PL+ H P++ P + H
Sbjct: 955 HLIHRPPIILHRPPLIVHRHPLIFHRPPLLVHRMPIIIRRPPLLIHRMPLIVHRPDLMVH 1014
Query: 252 SS--YIHASPVVQHFSP-VQHAP-VVHHAAIPIAVEHSDHVEDHAP 377
IH P++ H P + H P +VHH + + HS HV H P
Sbjct: 1015 RPPLIIHRMPILIHHHPWLIHRPAIVHHYGPNLMISHSHHVIHHYP 1060
Score = 43.6 bits (98), Expect = 1e-04
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP--VEH--SSYIHASPVV--QHFSPVQHAP 311
H ++ H AP++ H AP+I H P+V P V H S H P V Q F
Sbjct: 316 HRPDIVVHRAPIMIHRAPIIYHQPPVVVHRPAIVYHQPSIVFHQPPPVVRQPFLQSHDTW 375
Query: 312 VVHHAAIPIA---VEHSDHV-EDHAPAKYEFS-YSVEDPHTGDHKSQHETRDGDV 461
V H A+P++ HS ++ HA + + ++ E P+ +KS+ T+D DV
Sbjct: 376 VTHPVAVPVSTHIAHHSTYIGVPHAYSVHGYAGLGHEHPY---YKSKVPTKDSDV 427
Score = 41.5 bits (93), Expect = 4e-04
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = +3
Query: 129 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGP-IVHAAPV---EHSSYIHASPVVQHFSP 296
PSH H P++ H P++ H PLI H P +VH P+ IH P++ H
Sbjct: 953 PSH--LIHRPPIILHRPPLIVHRHPLIFHRPPLLVHRMPIIIRRPPLLIHRMPLIVHRPD 1010
Query: 297 VQ-HAPVVHHAAIPIAVEHSDHVEDHAPA 380
+ H P + +PI + H + H PA
Sbjct: 1011 LMVHRPPLIIHRMPILIHHHPWL-IHRPA 1038
Score = 40.7 bits (91), Expect = 7e-04
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP--VEH--SSYIHASPVVQHFSPVQHAP-- 311
H ++ H AP++ + AP+I H P+V P V H S H P V + P+ H+
Sbjct: 691 HRPDIIVHRAPIVLYRAPIIYHQPPVVVHRPAIVYHQPSIVFHQPPPVVN-QPIMHSHDT 749
Query: 312 -VVHHAAIPIAVEHSDHVEDHAPAKYEFSY 398
V H +P++ H H + +E +Y
Sbjct: 750 YVTHQTVVPLST-HISHAGAYNGVPHEMTY 778
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 75 DEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHS 254
D+ + + I+ H P H ++ H AP++ H AP+I H P++ P +
Sbjct: 453 DKKNNVIIKRPPIIYHPPPE---IFHRPDIVVHRAPLMVHRAPIIYHQPPVIVHRP---A 506
Query: 255 SYIHASPVVQHFS-PVQHAPVVH 320
H +V H P+ H PV+H
Sbjct: 507 IVYHQPELVFHQPFPMVHQPVMH 529
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 102 SQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPI-VHAAPVEHSSYIHASPV 278
++S E + P++ H P + H ++ H PI +H AP+ + H PV
Sbjct: 286 TKSKTEKGEKKNSVVIRRPPIIYHPPPEIYHRPDIVVHRAPIMIHRAPIIY----HQPPV 341
Query: 279 VQHF-SPVQHAP-VVHHAAIPI 338
V H + V H P +V H P+
Sbjct: 342 VVHRPAIVYHQPSIVFHQPPPV 363
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGP-IVHAAPVEHSSYIHASPVVQHFSP--VQHAPVVH 320
H P+L H L H P+I H P IVH H H P++ H P ++ P++
Sbjct: 944 HRPPILFHPPSHLIHRPPIILHRPPLIVH----RHPLIFHRPPLLVHRMPIIIRRPPLLI 999
Query: 321 HAAIPIAVEHSDHVEDHAP 377
H +P+ V D + P
Sbjct: 1000 H-RMPLIVHRPDLMVHRPP 1017
Score = 31.5 bits (68), Expect = 0.44
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPIV-HAAPVEHSS---YIHASPVVQ-HFSPVQHAPV 314
H P++ H PV+ H ++ H PI+ H P S + H S V F H V
Sbjct: 173 HRPPIIYHQPPVIVHRPAVVYHQPPIIFHQPPPAVSQPLLFSHDSFTVHPSFYATHHGSV 232
Query: 315 V----HHAAIPIAVEH 350
V H+ IP V +
Sbjct: 233 VRDYGHYIGIPNVVSN 248
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +3
Query: 96 VSSQSIVRHDEPS--HQA--TAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 242
V+ I+ H P H+ H P++ H P++ H P+I H +V+ P
Sbjct: 144 VNRPPIIYHPPPEIYHRPDIVVHRPPLVIHRPPIIYHQPPVIVHRPAVVYHQP 196
>SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)
Length = 476
Score = 50.4 bits (115), Expect = 9e-07
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +3
Query: 81 GHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIV-HAAPVEHSS 257
GH + V+ + D H T H P+ + PV H+ PL H+ P+ H+ P+
Sbjct: 384 GHSYHVTGHNDYLTDHNDHVTTDHSDPLTDRSDPVTDHSDPLTDHSDPLTDHSDPLTD-- 441
Query: 258 YIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHA 374
H+ P+ H P+ H+ P+ +HSDHV DH+
Sbjct: 442 --HSDPLTDHSDPL-----TDHSD-PLT-DHSDHVTDHS 471
>SB_57270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 47.2 bits (107), Expect = 8e-06
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Frame = +3
Query: 144 TAHYTP-VLSHAAPVLTHAAPLIQHAGPIVHAAP--VEHSSYI--HASPVVQHFSP--VQ 302
T ++P + H+ + H+ +QH+ V +P V+HS Y H+ VQH SP VQ
Sbjct: 275 TVQHSPYTVQHSPYTVQHSPYTVQHSPYTVQHSPYTVQHSPYTVQHSPYTVQH-SPYTVQ 333
Query: 303 HAP-VVHHAAIPIAVEHSDHVEDHAPAKYEFS-YSVE-DPHTGDH 428
H+P V H+ P V+HS + H+P + S Y+V+ P+T H
Sbjct: 334 HSPYTVQHS--PYTVQHSQYTVQHSPYTVQHSPYTVQHSPYTVQH 376
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Frame = +3
Query: 144 TAHYTP-VLSHAAPVLTHAAPLIQHAGPIVHAAP--VEHSSYI--HASPVVQHFSP--VQ 302
T ++P + H+ + H+ +QH+ V +P V+HS Y H+ VQH SP VQ
Sbjct: 91 TVQHSPYTVQHSPYTVQHSPCTVQHSPYTVQHSPCTVQHSPYTVQHSPYTVQH-SPYAVQ 149
Query: 303 HAP-VVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET 446
H+P V H+ P V+HS + + +F YS P QH T
Sbjct: 150 HSPYTVQHS--PYTVQHSPYTAQPIYSTAQFIYSTAQPIYSTAHRQHST 196
Score = 44.8 bits (101), Expect = 4e-05
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Frame = +3
Query: 99 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP--VEHSSYI--H 266
++Q I +P + +TAH H H IQH+ V +P V+HS Y H
Sbjct: 175 TAQFIYSTAQPIY-STAHRQHSTVHTRNSTAH----IQHSPYTVQHSPYTVQHSPYTVQH 229
Query: 267 ASPVVQHFSP--VQHAP-VVHHAAIPIAVEHSDHVEDHAPAKYEFS-YSVE-DPHTGDH 428
+S VQH SP VQH+P V H+ P V+HS + H+P + S Y+V+ P+T H
Sbjct: 230 SSYTVQH-SPYTVQHSPYTVQHS--PYTVQHSSYTVQHSPYTVQHSPYTVQHSPYTVQH 285
Score = 40.7 bits (91), Expect = 7e-04
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = +3
Query: 174 AAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHF--SP--VQHAP-VVHHAAIPI 338
A P+ + A + A PI A +HS+ +H H SP VQH+P V H+ P
Sbjct: 169 AQPIYSTAQFIYSTAQPIYSTAHRQHST-VHTRNSTAHIQHSPYTVQHSPYTVQHS--PY 225
Query: 339 AVEHSDHVEDHAPAKYEFS-YSVE-DPHTGDHKS 434
V+HS + H+P + S Y+V+ P+T H S
Sbjct: 226 TVQHSSYTVQHSPYTVQHSPYTVQHSPYTVQHSS 259
Score = 36.3 bits (80), Expect = 0.015
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Frame = +3
Query: 237 APVEHSS-YIHASPVVQHFSP--VQHAP-VVHHAAIPIAVEHSDHVEDHAPAKYEFS-YS 401
A +++S+ +I S +SP VQH+P V H+ P V+HS + H+P + S Y+
Sbjct: 20 AHIQYSTAHIQYSTAHTQYSPYTVQHSPYTVQHS--PYTVQHSSYTVQHSPYTVQHSPYT 77
Query: 402 VE-DPHTGDHKS 434
V+ P+T H S
Sbjct: 78 VQHSPYTAQHSS 89
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 40.7 bits (91), Expect = 7e-04
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 96 VSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASP 275
V+ I+ H P H ++ H AP++ H P+I H P++ P + H P
Sbjct: 1517 VNRPPIIYHPPPE---VYHRPDIVVHRAPIVLHRPPIIYHQPPVIVHRP---AVVYHQPP 1570
Query: 276 VVQHF-SPVQHAPVVH 320
+V H P H PV+H
Sbjct: 1571 IVFHQPPPAVHQPVLH 1586
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +3
Query: 111 IVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPI-VHAAPVEHSSYIHASPVVQH 287
I +HD+ V+ + P++ H P + H I VH AP+ IH P+V H
Sbjct: 2 IDKHDKKKRSPETKKKDVVVNRPPIIYHPPPEVYHRPEIVVHRAPI----LIHRPPIVYH 57
Query: 288 FSP-VQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 413
P V H P V + PI V H + P Y V P
Sbjct: 58 QPPVVVHRPAVVYHQPPI-VFHQPPPAVNQPMLYSHDSFVMHP 99
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 159 PVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIH 266
PV+ H AP++ H P++ H P+V AP+ H H
Sbjct: 463 PVVYHQAPLVVHKPPIVYHRPPVVMPAPIYHMPVYH 498
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +3
Query: 96 VSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASP 275
V+ I+ H P H ++ H AP+L H P++ H P+V P + H P
Sbjct: 21 VNRPPIIYHPPPE---VYHRPEIVVHRAPILIHRPPIVYHQPPVVVHRP---AVVYHQPP 74
Query: 276 VVQHFSP 296
+V H P
Sbjct: 75 IVFHQPP 81
Score = 36.3 bits (80), Expect = 0.015
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 159 PVLSHAAPVLTHAAPLIQHAGP-IVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHH 323
PV+ V+ P++ H P +VH P+ + H PVV +P+ H PV HH
Sbjct: 449 PVIVPQPAVIVQRPPVVYHQAPLVVHKPPIVY----HRPPVVMP-APIYHMPVYHH 499
Score = 35.1 bits (77), Expect = 0.035
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPV--EHSSYI-HASPVVQHFSPVQH 305
H PV+ H V+ H P++ H P P+ H S++ H + V QH + V H
Sbjct: 57 HQPPVVVHRPAVVYHQPPIVFHQPPPAVNQPMLYSHDSFVMHPAAVAQHVNSVVH 111
Score = 34.3 bits (75), Expect = 0.062
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 11/124 (8%)
Frame = +3
Query: 117 RHDEPSHQA--TAHYTPVLSHAAPVLTHAAPLIQHAGPIV--HAAPVEHSSYIHA-SPVV 281
R D H+A H P++ H PV+ H ++ H PIV P H +H+ V
Sbjct: 1533 RPDIVVHRAPIVLHRPPIIYHQPPVIVHRPAVVYHQPPIVFHQPPPAVHQPVLHSHDTFV 1592
Query: 282 QHFSPV---QHAPVVH---HAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHE 443
H S + + V H + IP VE D + D + + H G + H
Sbjct: 1593 VHPSAAYEPRGSTVSHESNYIGIPSHVEQYDDLHDFGGDSFGAYHG--SYHGGGYHGYHY 1650
Query: 444 TRDG 455
R G
Sbjct: 1651 GRHG 1654
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPIV-HAAPVEHSSYIHAS--PVVQHFSPVQHAPVVH 320
H ++ H A V+ H P++ H P+V H P + I S V H H+ VH
Sbjct: 268 HQPSIVYHQASVVIHRPPIVYHQPPVVFHQPPPMNKQPIMNSIDAYVPHAFFEPHSSEVH 327
Query: 321 HAA 329
H A
Sbjct: 328 HVA 330
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Frame = +3
Query: 117 RHDEPSHQA--TAHYTPVLSHAAPVLTHAAPLIQHAGPIV--HAAPVEHSSYIHA-SPVV 281
R D HQ H V+ H V+ H P++ H P+V P+ +H+ V
Sbjct: 554 RPDVVVHQPDYVIHRPSVVYHQPSVVVHRPPIVYHQPPVVFHQPPPMVRQPVMHSHDTYV 613
Query: 282 QHFSPVQHAPVVHHAAIPIAVEH 350
H +A + HAA + H
Sbjct: 614 AHAYHEPYASTISHAATYVGAPH 636
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPIV--HAAPVEHSSYIHA-SPVVQH--FSPVQHAPV 314
H V+ H APV+ H ++ H P+V P+ H IH+ V H F P + V
Sbjct: 1384 HRPSVVLHQAPVVVHRPAVVYHQPPVVVHQPPPLVHQPIIHSHDTYVSHPFFEPFS-SHV 1442
Query: 315 VH 320
+H
Sbjct: 1443 IH 1444
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP 242
H ++ H V+ H P+I H+ P+V P
Sbjct: 1084 HQPSIVYHQPSVVVHRPPIIYHSPPVVFHQP 1114
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +2
Query: 20 LQNCCSLL-DFGYLPRWCYRRGPRPCCVF-PKHRSP*RAFSSSNGTLYPSIESCCSSTD- 190
L+NC + + F L +C R P+ K R + SS + + PS C + +D
Sbjct: 831 LRNCSACVAPFILLDSYCVRECPQKGHFLNAKLRQCKKCHSSCSSCIGPSANDCITCSDP 890
Query: 191 SRSPFDSTCRSYCSRRPRGTFFVYTCFASSPTLQPCATCSSRAPRCDS 334
S + TC++ C+ C PT CA+CSS P+C S
Sbjct: 891 SNALIGFTCKANCTPGQFKNTATRVCENCHPT---CASCSSSGPKCTS 935
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 173 CCSSTDSRSPFDSTCRSYCSRRPRGTFFVYTCFASSPTLQPCATCSSRA-PRC 328
C + D+R +++C + C P GTF V P + CA C+ RC
Sbjct: 735 CITCGDNRVLSNNSCINLC---PSGTFLVKGIHRCRPCHESCAECTGAGHDRC 784
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 177 APVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSD 356
+PV H+ + +H+ H++ EHS SPV +HFS +H+PV + + S+
Sbjct: 1302 SPVSEHSR-VSEHSSVSEHSSVSEHSPVSEHSPVSEHFSVSEHSPVSKQSPVSEQSPVSE 1360
Query: 357 H--VEDHAP 377
H V +H+P
Sbjct: 1361 HSPVSEHSP 1369
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 231 HAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVED 410
H+ EHS S V +H S +H+PV H+ P++ EH V +H+P + S +
Sbjct: 1301 HSPVSEHSRVSEHSSVSEHSSVSEHSPVSEHS--PVS-EHFS-VSEHSPVSKQSPVSEQS 1356
Query: 411 P 413
P
Sbjct: 1357 P 1357
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 135 HQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPV 314
H + ++ V H++ ++ +P+ +H+ H + EHS SPV + +H+PV
Sbjct: 1307 HSRVSEHSSVSEHSS--VSEHSPVSEHSPVSEHFSVSEHSPVSKQSPVSEQSPVSEHSPV 1364
Query: 315 VHHAAI 332
H+ +
Sbjct: 1365 SEHSPV 1370
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 135 HQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPV 314
H + + ++ V H+ PV H+ P+ +H H+ + S SPV +H +H+PV
Sbjct: 1313 HSSVSEHSSVSEHS-PVSEHS-PVSEHFSVSEHSPVSKQSPVSEQSPVSEHSPVSEHSPV 1370
Query: 315 VH 320
+
Sbjct: 1371 TN 1372
Score = 31.5 bits (68), Expect = 0.44
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 84 HGHAVSSQSIVRHDEPS-HQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPV-EHSS 257
H + H S H + + ++PV H+ PV H + + P+ +PV E S
Sbjct: 1301 HSPVSEHSRVSEHSSVSEHSSVSEHSPVSEHS-PVSEHFS--VSEHSPVSKQSPVSEQSP 1357
Query: 258 YIHASPVVQHFSPVQHAP 311
SPV +H SPV + P
Sbjct: 1358 VSEHSPVSEH-SPVTNIP 1374
Score = 30.7 bits (66), Expect = 0.76
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 210 QHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYE 389
+H+ H+ EHSS S V +H +H+PV H ++ EHS V +P +
Sbjct: 1300 EHSPVSEHSRVSEHSSVSEHSSVSEHSPVSEHSPVSEHFSVS---EHSP-VSKQSPVSEQ 1355
Query: 390 FSYSVEDP 413
S P
Sbjct: 1356 SPVSEHSP 1363
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 120 HDEP-SH-QATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEH-SSYIHASPVVQHF 290
H +P +H Q AH P ++H P + H P+ H P+ H P+ H H P+ H
Sbjct: 430 HIQPMAHIQPMAHIQP-MAHIQP-MAHIQPMA-HIQPMAHIQPMAHIQPMAHIQPMA-HI 485
Query: 291 SPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRD 452
P+ H + H ++ H++ AP + + DP+ ++ RD
Sbjct: 486 QPMAHIQPMAHIQPMAHIKPMAHIQPMAPIQPMANIQPIDPNKPVQSLRNAVRD 539
>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
Length = 434
Score = 38.7 bits (86), Expect = 0.003
Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 7/118 (5%)
Frame = +3
Query: 84 HGHAVSSQSIVRHDEPSHQATAHYTPV-LSHAAPVLTHAAPLIQHAGPIVHAA-PVEHSS 257
H H + + H +H +T H+ V S P +T+A+ H I HA+ P H
Sbjct: 73 HPHIARASTPTTHPYITHASTTHHYIVHASTTHPYITYASTPTTHPH-IPHASTPTTHPH 131
Query: 258 YIHAS-----PVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPH 416
HAS P + H S P + HA+ P H H P S PH
Sbjct: 132 ITHASTPTTHPHITHASTPTTHPHITHASTPTTHPHIAHASTTHPYITYASTPTTHPH 189
>SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6)
Length = 249
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPI-VHAAPVEHSSYIHASPVVQHFSPV-QHAPVVHH 323
H TP+ H P+ H PL QH P+ H P+ H +P+ QH +P+ QH +
Sbjct: 147 HKTPLRQHKTPLRQHKTPLRQHKTPLRQHKTPLRQ----HKTPLRQHKTPLRQHKTSLRQ 202
Query: 324 AAIPIAVEHSDHVEDH 371
I + +H + H
Sbjct: 203 HKISLQ-QHKTPLRQH 217
Score = 33.9 bits (74), Expect = 0.082
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Frame = +3
Query: 150 HY-TPVLSHAAPVLTHAAPLIQHAGPI-VHAAPVEHSSYIHASPVVQH-FSPVQHAPVVH 320
HY TP+ H P L H PL QH P+ H P+ H + + QH S QH +
Sbjct: 62 HYKTPLRHHKTPYLQHKTPLRQHKTPLRHHKTPLRQ----HKTSLQQHKISLQQHKTRLR 117
Query: 321 HAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHT--GDHKS---QHET 446
P+ +H + H ++ + T HK+ QH+T
Sbjct: 118 QHKTPLR-QHKTPLRQHKTPLRQYKTPLRQHKTPLRQHKTPLRQHKT 163
>SB_29375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 36.7 bits (81), Expect = 0.012
Identities = 31/102 (30%), Positives = 47/102 (46%)
Frame = +3
Query: 114 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFS 293
V+H P YTPV S A + +++ V +APV+H+ + ++PV ++
Sbjct: 225 VKHT-PVQSVPVKYTPVQSAPAKYTPVQSAPVKYTP--VESAPVKHTP-VQSAPV--KYT 278
Query: 294 PVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHT 419
PVQ APV + V+H+ AP KY S HT
Sbjct: 279 PVQSAPVKYRPVESAPVKHTP--VQSAPVKYTPVESAPVKHT 318
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/94 (26%), Positives = 42/94 (44%)
Frame = +3
Query: 105 QSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQ 284
QS + P A YTPV S + +++ V +A V+++ + ++PV
Sbjct: 111 QSALVKYTPVESAPVKYTPVESAPVKYTPVESKPVKYTP--VQSALVKYTP-VESAPV-- 165
Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKY 386
++PV+ APV H V+H+ P KY
Sbjct: 166 KYTPVESAPVKHTPVESAPVKHTP--VQSVPVKY 197
>SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)
Length = 356
Score = 35.9 bits (79), Expect = 0.020
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 111 IVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHF 290
I+ H P H ++ H AP++ H +I H P+V P + H P+V H
Sbjct: 157 IIYHPPPE---VYHRPDIVVHRAPIMLHRPAIIYHQPPVVVHRP---AIIYHQPPIVFHQ 210
Query: 291 -SPVQHAPVVH 320
PV + P++H
Sbjct: 211 PPPVVNQPILH 221
Score = 35.1 bits (77), Expect = 0.035
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHS--SYIHASPVVQHFSPVQHA 308
H PV+ H ++ H P++ H P V P+ HS +Y+ V Q S + HA
Sbjct: 188 HQPPVVVHRPAIIYHQPPIVFHQPPPVVNQPILHSHDTYVTRPRVYQSTSHIGHA 242
Score = 34.7 bits (76), Expect = 0.047
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Frame = +3
Query: 114 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFS 293
V + + H P++ H P + H ++ H PI+ P + H PVV H
Sbjct: 141 VENGSRKNSIVIHRPPIIYHPPPEVYHRPDIVVHRAPIMLHRP---AIIYHQPPVVVHRP 197
Query: 294 PV--QHAPVVHHAAIPIAVEHSDHVED 368
+ P+V H P+ + H D
Sbjct: 198 AIIYHQPPIVFHQPPPVVNQPILHSHD 224
>SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 1242
Score = 35.5 bits (78), Expect = 0.027
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 9/135 (6%)
Frame = +3
Query: 63 GGVIDEGHGHA---VSSQSIVRHDE---PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGP 224
G + HGH V+S + + P + TP H APVLT + HA
Sbjct: 121 GSAMTPPHGHTALTVTSPHVENGPQDTLPHRNSGPQVTPPYGHTAPVLT-----LPHADN 175
Query: 225 IVHAAPVEHSSYIHASPVV--QHFSPVQHA-PVVHHAAIPIAVEHSDHVEDHAPAKYEFS 395
A P SY H+ V+ H A P H+ + + H+D+ P +
Sbjct: 176 GPQATP----SYGHSGSVLTLSHADNGPKATPPYGHSGSVLTLPHADNGPKATPPHGHTA 231
Query: 396 YSVEDPHTGDHKSQH 440
+V PH DHK+ +
Sbjct: 232 LTVTSPHRMDHKTPY 246
>SB_8567| Best HMM Match : EB (HMM E-Value=2.3)
Length = 179
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2
Query: 319 CTTGACCTGLKCWTTGEACIYEECSTGA 236
C TGA C G++C +TG C ECSTGA
Sbjct: 128 CPTGAHCEGVEC-STGTHCEGVECSTGA 154
>SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 34.3 bits (75), Expect = 0.062
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +3
Query: 84 HGHAVSSQSIVRHD-EPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHS-S 257
H +V+ V H +H + ++ ++HA V TH L HA + HA V H+ S
Sbjct: 1511 HALSVTHALSVTHALSVAHALSVTHSLSVTHALSV-THVLSLT-HALSVTHALSVTHALS 1568
Query: 258 YIHASPVVQ-----HFSPVQHAPVVHHA 326
+ HA V Q H V HAP V HA
Sbjct: 1569 FAHALSVTQSLSVTHALSVTHAPNVTHA 1596
Score = 30.3 bits (65), Expect = 1.0
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 84 HGHAVSSQSIVRHD-EPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSY 260
H +V+ V H +H + + L+HA V THA + HA HA V S
Sbjct: 1523 HALSVAHALSVTHSLSVTHALSVTHVLSLTHALSV-THALS-VTHALSFAHALSVTQSLS 1580
Query: 261 IHASPVVQHFSPVQHAPVVHHA 326
+ + V H V HA V HA
Sbjct: 1581 VTHALSVTHAPNVTHALSVTHA 1602
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 186 LTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHA 326
+THA + HA + HA V H+ + + V H V HA V HA
Sbjct: 1581 VTHALS-VTHAPNVTHALSVTHAYSVTQALSVMHALSVTHALCVAHA 1626
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 156 TPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHS-SYIHASPVVQHFSPVQHAPVVHHA 326
T LS A + + + HA + HA V H+ S HA V Q S V HA V HA
Sbjct: 1564 THALSFAHALSVTQSLSVTHALSVTHAPNVTHALSVTHAYSVTQALS-VMHALSVTHA 1620
>SB_38532| Best HMM Match : CRAM_rpt (HMM E-Value=2.1e-29)
Length = 263
Score = 33.9 bits (74), Expect = 0.082
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 135 HQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPV----VQHFSPVQ 302
H H+ V HA + + QH + H A V+H + S + +Q S +Q
Sbjct: 184 HATVQHHATVQHHAISCNSATSCNSQHRTTMQHHATVQHHAISCNSAISCNIMQQCSIMQ 243
Query: 303 HAPVVHHAAIPI 338
HA V HHA + I
Sbjct: 244 HATVQHHAIVNI 255
>SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 33.5 bits (73), Expect = 0.11
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 11/114 (9%)
Frame = +3
Query: 135 HQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP--VEH-SSYIH-ASPVVQHFSPVQ 302
H H TP HA P HA P HA P A +H + Y H A+P + + +P +
Sbjct: 38 HPYKNHATPYKDHATPYKDHATPYKDHATPYKDLATSYKDHVTPYKHLATPYIDYATPYK 97
Query: 303 H-APVVHHAAIP---IAVEHSDHVEDHAPAKYE---FSYSVEDPHTGDHKSQHE 443
A A P +A + D + +++ F+Y H DH + ++
Sbjct: 98 DLATPYKDLATPYKDLATPYKDLAISYKDLRHKKPCFTYKDHATHYKDHATPYK 151
>SB_26106| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.53)
Length = 291
Score = 32.7 bits (71), Expect = 0.19
Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 2/120 (1%)
Frame = +3
Query: 117 RHDEPSHQATAHYTPVLSH-AAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFS 293
+HD H T H T ++ H A T +H+ A ++ + A +S
Sbjct: 102 QHDTTQHDTTQHNTTIVRHDTAQHDTARHDTARHSTARHSTARHSNARHSAAQHSTTQYS 161
Query: 294 PVQHAPVVHHAAIPIAVEHSDHVEDH-APAKYEFSYSVEDPHTGDHKSQHETRDGDVVKG 470
Q++ H AA HS H + + T H ++H T G
Sbjct: 162 KTQYSTTQHSAAQHSTTRHSTGTTGHDTTQNHTVQHDTVQHDTAQHDTRHSTTQYSTTHG 221
>SB_41882| Best HMM Match : Amelogenin (HMM E-Value=2)
Length = 264
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +3
Query: 153 YTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVE--HSSYIHASPVVQHFSPVQHAPVVHHA 326
Y PV H + H P+ + I H PV H + H+ PV QH + A V H
Sbjct: 67 YFPVPQHDLLTMHHPIPVNNNHVTIHHPIPVNQHHVTIHHSIPVYQHHVTMHQAINVEHH 126
Query: 327 AIPIAVEHSDHVEDH 371
P A++ E H
Sbjct: 127 PEP-AIQSESIPEGH 140
>SB_40708| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1976
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +2
Query: 176 CSSTDSRSPFDSTCRSYCSRRPRGTFFVYTCFASSPTLQPCATCSSRAPRCDSN 337
CS + SP +TCR C RR Y C Q T + CD++
Sbjct: 247 CSGPQTGSPMSNTCRRSCQRRILQERLGYLCVTQCTAAQYGNTVTRECSPCDTS 300
>SB_51596| Best HMM Match : DUF652 (HMM E-Value=8.3)
Length = 92
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 195 AAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIA 341
AA +++ ++ A V H++Y+ A+ +V+H S V A +V H A IA
Sbjct: 41 AAMMVRPNAYVIAAMMVGHTAYVIAAMMVRHTSYVIAAMMVRHTAYVIA 89
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 165 LSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIA- 341
+ H A V+ AA +++H ++ A V ++Y+ A+ +V+ + V A +V H A IA
Sbjct: 9 VGHTAHVI--AALMVRHTSYVIAAMMVRPNAYVIAAMMVRPNAYVIAAMMVGHTAYVIAA 66
Query: 342 --VEHSDHV 362
V H+ +V
Sbjct: 67 MMVRHTSYV 75
>SB_5401| Best HMM Match : DUF652 (HMM E-Value=3)
Length = 287
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 195 AAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIA 341
AA +++ ++ A V H++Y+ A+ +V+H S V A +V H A IA
Sbjct: 89 AAMMVRPNAYVIAAMMVGHTAYVIAAMMVRHTSYVIAAMMVRHTAYVIA 137
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 165 LSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIA- 341
+ H A V+ AA +++H ++ A V ++Y+ A+ +V+ + V A +V H A IA
Sbjct: 57 VGHTAHVI--AALMVRHTSYVIAAMMVRPNAYVIAAMMVRPNAYVIAAMMVGHTAYVIAA 114
Query: 342 --VEHSDHV 362
V H+ +V
Sbjct: 115 MMVRHTSYV 123
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 319 TTLRFQLPSNTPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KANTLYSSLMV 498
+TL L S TP + + PR++ S +PS P + P V+S L S+ ++
Sbjct: 804 STLIATLQSPTPQTTTVATPRTVISALPSPTVVPTVPPAKPVPTPVVSSLTTPLVSATVL 863
Query: 499 PSARSNT 519
++++ T
Sbjct: 864 NASQAQT 870
>SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 30.7 bits (66), Expect = 0.76
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 90 HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 215
H +S IVRH + S H+ + H + H++ +I+H
Sbjct: 31 HHQTSSDIVRHHQTSSDIIRHHQTFIRHHQTFIRHSSDIIRH 72
>SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 30.7 bits (66), Expect = 0.76
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 231 HAAPVEHSSYIHASPVVQHFSPVQHAPVVHHA 326
HAAP + YI P V H P + ++ HA
Sbjct: 50 HAAPTAKNWYIKYHPAVSHLIPAKRCDILQHA 81
>SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQHAGPIV 230
H P L H P+L H P++ H P++
Sbjct: 80 HTRPTLGHTRPMLGHTRPMLGHTHPLL 106
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 150 HYTPVLSHAAPVLTHAAPLIQH 215
H P+L H P+L H PL+ H
Sbjct: 87 HTRPMLGHTRPMLGHTHPLLGH 108
>SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 30.3 bits (65), Expect = 1.0
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Frame = +3
Query: 84 HGHAVSSQSIVRHDEPSHQA-TAHYTPVLSHAAPVLTHAAPLIQH---AGPIVHAAPVE- 248
H H ++ + + A T+HYTP SH +H H VHA +
Sbjct: 43 HAHYTHTKRPIHDTRSTLDAHTSHYTPRTSHYTRHTSHYTHRTSHYTRRMRTVHATYITL 102
Query: 249 HSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAP 377
H+ Y H + V Q+ P H + H+ ++ HAP
Sbjct: 103 HAPYAHTTRTV----CAQYMPRTSHRTHRMRTLHAMYITLHAP 141
>SB_58551| Best HMM Match : GLTT (HMM E-Value=5.7e-23)
Length = 272
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2
Query: 337 IGIAAWCTTGACCTGLKCWTTG 272
IG CTTG C TG+ WTTG
Sbjct: 97 IGTTGICTTGICTTGI--WTTG 116
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 337 IGIAAWCTTGACCTGL---KCWTTGEACIYEECSTG 239
IG CTTG C TG+ +TTG C C+TG
Sbjct: 187 IGTTGICTTGICTTGICTTGIFTTG-ICTTGICTTG 221
>SB_16860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 691
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = +2
Query: 110 HRSP*RAFSSSNGTLYPSIESCCSSTDSRSPFDSTCRSYCSRRPRGTFFVYTCFASSPTL 289
HRS R F G S++ C + S + F+S C R P T FVY L
Sbjct: 297 HRSDIRPFLEHRGVQLESLQLCNTGNISANAFESCCNLVELRLPECT-FVYESDIELYLL 355
Query: 290 QPC 298
+ C
Sbjct: 356 EAC 358
>SB_6268| Best HMM Match : Extensin_1 (HMM E-Value=0.098)
Length = 162
Score = 30.3 bits (65), Expect = 1.0
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 123 DEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQ 302
D ++ TA + V S A VL PL+ P+VH P+ H +H P+V P+
Sbjct: 38 DHYGNETTAVFKNV-SVAVTVLHD--PLVHD--PLVHE-PLVHEPLVH-EPLVHE--PLV 88
Query: 303 HAPVVHHAAIPIAVEHSDHVED---HAPAKYE 389
H P+VH + + H V D H P +E
Sbjct: 89 HEPLVHEPLVHEPLVHEPLVHDPLVHEPLVHE 120
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 201 PLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIP 335
PL+ P+VH P+ H +H P+V P+ H P+VH +P
Sbjct: 111 PLVHE--PLVHE-PLVHEPLVH-EPLVHE--PLVHEPLVHEPLVP 149
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Frame = +3
Query: 120 HDEPSHQATA----HYT---PVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPV 278
HD+ +H T YT P L H A +L H + QH I H ++
Sbjct: 709 HDDENHPVTTTCRCEYTEQAPTLQHCATLLAHTLLINQHIKAICHRCEEGSDEFVRTDKA 768
Query: 279 VQHFSPVQHAPVV 317
++ + V V+
Sbjct: 769 LKSINKVSSTIVI 781
>SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031)
Length = 598
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 201 PLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVED---H 371
PL+ P+VH P+ H +H P+V P+ H P+VH + + H V D H
Sbjct: 490 PLVHE--PLVHE-PLVHEPLVH-EPLVHE--PLVHEPLVHEPLVHEPLVHDPLVHDPLLH 543
Query: 372 APAKYE 389
P +E
Sbjct: 544 DPLVHE 549
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/82 (31%), Positives = 38/82 (46%)
Frame = +3
Query: 123 DEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQ 302
D ++ TA + V S A VL PL+ P+VH P+ H +H P+V P+
Sbjct: 462 DHYGNETTAVFKNV-SVAVTVLHD--PLVHD--PLVHE-PLVHEPLVH-EPLVHE--PLV 512
Query: 303 HAPVVHHAAIPIAVEHSDHVED 368
H P+VH + + H V D
Sbjct: 513 HEPLVHEPLVHEPLVHEPLVHD 534
>SB_28441| Best HMM Match : GLTT (HMM E-Value=3.7e-28)
Length = 447
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -2
Query: 337 IGIAAWCTTGACCTGLKCWTTGEACIYEECSTG 239
IG CTTG C TG+ C TTG C C+TG
Sbjct: 387 IGTTGICTTGICTTGI-C-TTG-ICTTGICTTG 416
>SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/96 (25%), Positives = 33/96 (34%)
Frame = +3
Query: 132 SHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAP 311
S TAH +P H P H +P +H A H SP +H P
Sbjct: 379 SRTNTAHISPY-KHCPHQPVQTLPTSARTNT-AHISPYKHCLLTLARTNTAHISPCKHRP 436
Query: 312 VVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHT 419
HH + S + +P K+ V+ P T
Sbjct: 437 --HHPVQTLPTSASANTAHISPCKHCPHQPVQTPPT 470
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Frame = +3
Query: 129 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS--YIHASPVVQHFSP-- 296
P+ A TP + AAPV AAP + AAPV ++ +P +P
Sbjct: 48 PTAAPAAPVTPTAAPAAPVTPTAAPAARVTPTAAPAAPVTPTAAPAARVTPTAARVTPTA 107
Query: 297 VQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVED 410
APV AA A H + + ++ F +D
Sbjct: 108 APAAPVTPTAAPAPAQSHEEVAAPNLRQRHVFVPETDD 145
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 402 RNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG*SVGLLAKHVYTK 253
R R H ++ R++R+ +RQL AR+E +QG +GL + +T+
Sbjct: 1486 RGRRCH--EDNSRRYERAAQRQLNLDNTARVEQTSQG-QLGLRREEEHTR 1532
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Frame = +3
Query: 129 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS--YIHASPVVQHFSP-- 296
P+ A TP + AAPV AAP + AAPV ++ +P +P
Sbjct: 205 PTAAPAAPVTPTAAPAAPVTPTAAPAARVTPTAAPAAPVTPTAAPAARVTPTAARVTPTA 264
Query: 297 VQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVED 410
APV AA A H + + ++ F +D
Sbjct: 265 APAAPVTPTAAPAPAQSHEEVAAPNLRKRHVFVPETDD 302
>SB_7305| Best HMM Match : Extensin_2 (HMM E-Value=0.043)
Length = 908
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +3
Query: 258 YIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQ 437
Y S + HF+ + H + H+ ++ ++H P+K +++ DP T + S
Sbjct: 695 YFGPSNTLLHFA-IPHPQIPHYTSLFRTLKHPTTFPYSGPSKTSLHFAISDPRTPYYTSL 753
Query: 438 HET 446
T
Sbjct: 754 FHT 756
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 289 SALCNMLQSCTTLRFQLPSNTPIMSKIMLPR 381
++L + L+ TTLR+ PSNTP+ I PR
Sbjct: 751 TSLFHTLKYLTTLRYSGPSNTPLHFPIPDPR 781
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +3
Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRD 452
HF+ + H H+ ++ +EH + P+ +++ DP T + S TR+
Sbjct: 844 HFA-IPHPRTPHYTSLFHTLEHLTTLRYSTPSNTSLHFAIPDPQTPHYTSLIRTRN 898
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 289 SALCNMLQSCTTLRFQLPSNTPIMSKIMLPRS 384
++L L+ TTLR+ PSNT + I PR+
Sbjct: 786 TSLFRTLEHLTTLRYSTPSNTLLYFAIPHPRT 817
>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
Length = 958
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +3
Query: 258 YIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQ 437
Y S + HF+ + H + H+ ++ ++H P+K +++ DP T + S
Sbjct: 644 YFGPSNTLLHFA-IPHPQIPHYTSLFRTLKHPTTFPYSGPSKTSLHFAISDPRTPYYTSL 702
Query: 438 HET 446
T
Sbjct: 703 FHT 705
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 289 SALCNMLQSCTTLRFQLPSNTPIMSKIMLPR 381
++L + L+ TTLR+ PSNTP+ I PR
Sbjct: 700 TSLFHTLKYLTTLRYSGPSNTPLHFPIPDPR 730
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 289 SALCNMLQSCTTLRFQLPSNTPIMSKIMLPRS 384
++L + L+ TTLR+ PSNT + I PR+
Sbjct: 910 TSLFHTLEHLTTLRYSTPSNTSLHFAIPHPRT 941
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 289 SALCNMLQSCTTLRFQLPSNTPIMSKIMLPRS 384
++L L+ TTLR+ PSNT + I PR+
Sbjct: 735 TSLFRTLEHLTTLRYSTPSNTSLHFAIPHPRT 766
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 289 SALCNMLQSCTTLRFQLPSNTPIMSKIMLPRS 384
++L + L+ TTLR+ PSNT + I PR+
Sbjct: 770 TSLFHTLEHLTTLRYSTPSNTLLYFAIPHPRT 801
>SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)
Length = 998
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -3
Query: 504 GWNHQAGVESIRLSRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRR 340
G +H A I L++ G+ +RR RR ++HTSRE+ R D S RR
Sbjct: 416 GEDHMAATRRI-LTQDRRLCINAGSHERRKRKRRRKRKSHTSREN--RLDISARR 467
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 179 SSTDSRSPFDSTCRSYCSRRPRGTFF 256
SS+D R P STCR + PR + F
Sbjct: 2700 SSSDRRDPVTSTCRHSATSSPRESIF 2725
>SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 153 YTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSP-VQHAPVVHHAA 329
++P+L + L + P I ++ +V P+ S Y H+S +V H+S V P ++ ++
Sbjct: 435 HSPLLVNHYSQLVNRYPKINYSS-LVTRLPLSVSRYCHSSLLVNHYSQLVNRYPKINSSS 493
Query: 330 IPIAVEHSDHVEDHAP 377
+ + S H+P
Sbjct: 494 LVTRLSLSVTRYRHSP 509
>SB_41288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 99 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 215
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_35669| Best HMM Match : CCT (HMM E-Value=9.1)
Length = 101
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 99 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 215
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -1
Query: 164 YWGIMCRCLMRRLVMANDALGRHSMAVALVYNTTLANSQNRADYSN 27
Y G+MC + + +D+ RH M + L+ ++ ++R D N
Sbjct: 165 YIGVMCDRCSHKAIRKSDSKNRHDMELPLLLPPCNSSKRSRHDSEN 210
>SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 108 SIVRHDEPSH-QATAHYTPV-LSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVV 281
SI + DE + A +Y +SH+ P H P A P + + SY+H SP++
Sbjct: 139 SIQKQDEAAGLMAPMYYQQAHMSHSRPYWNHNVPSDWLADPPIITPNMSCYSYVH-SPII 197
Query: 282 QHFSP 296
+P
Sbjct: 198 HQSAP 202
>SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 33 VVCSILAICQGGVIDEGHGHAVSSQSI 113
+V ++ I +GGV+D HG A+ S++I
Sbjct: 158 LVMAMETIGEGGVVDNSHGKALDSKNI 184
>SB_58339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 99 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 215
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_51497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Frame = +3
Query: 186 LTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQH------APV--VHHAAIPIA 341
L + L + P H S + H+S ++ S QH AP H +
Sbjct: 52 LVYTTVLAGNRVPHNHPHAPTRSRHGHSSSIITSRSQQQHNHVTVTAPTRSCHGHSSSTV 111
Query: 342 VEHSDHVEDHAPAKYEFSYSVEDPHTGDH 428
S H DH AK++ Y V H DH
Sbjct: 112 TSRSQHQHDHVTAKHQHDY-VTAQHQHDH 139
>SB_36300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -3
Query: 435 GTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQ 295
G CDR+ + ++R + + HD+ +++ + + GAR E +++
Sbjct: 29 GACDRKAATIKSHIRQYVNEGHDVVTAANLQEAILADGGARGEGISE 75
>SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 99 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 215
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 99 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 215
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_4465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 99 SSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQH 215
+++ +V PSH +A YTP S AP L H
Sbjct: 37 TTRGLVEEPGPSHSRSADYTPDHSEQAPASASRKKLSDH 75
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 340 PSNTPIMSKIMLP-RSMSSHIPSRIPTPAITSPNTK 444
P+ K++LP RS + PSR+PTP+ +P+ +
Sbjct: 328 PAGPKKPDKLILPDRSSPTGKPSRVPTPSKATPSKR 363
>SB_46011| Best HMM Match : DNA_ligase_ZBD (HMM E-Value=2.9)
Length = 373
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 132 SHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAP 311
++Q T HY P+L P +T L +H + + A Y + QH
Sbjct: 283 AYQNTRHYCPILLIKTPGITAQHCLSKHPALLPNIACQNTRHYYMTLLIKTPGITAQHCL 342
Query: 312 VVHHAAIP-IAVEHSDH 359
H A +P IA +++ H
Sbjct: 343 SKHPALLPNIACQNTRH 359
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Frame = +3
Query: 126 EPSHQATAH-YTPVLSHAAPVLTHAA-----PLIQHAGPIVHAAPVEHSSYIHASPVVQH 287
EP+ A PV + PVL A P IQ P+ P+E+ ++ V
Sbjct: 3679 EPTFSVNAPTIKPVFNEDLPVLQSAVIRPPEPEIQRTAPVSPQTPIEYKCNKCSNSYVSF 3738
Query: 288 FSPVQHAPVVHH 323
+H VHH
Sbjct: 3739 SEMKKHMSTVHH 3750
>SB_11408| Best HMM Match : zf-C2H2 (HMM E-Value=0.072)
Length = 54
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 453 HHGFRVGTCDRRCGDPRRNMRTHTSRE 373
H R G C RR D R++RTHT +
Sbjct: 12 HRRPRCGECFRRTKDLTRHLRTHTGEK 38
>SB_621| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1432
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 354 DHVEDHAPAKYEFSYSVEDPH-TGDHKSQH 440
D DH P YE SY ED H + ++ S H
Sbjct: 1355 DRGTDHLPRSYEKSYRREDHHRSREYSSDH 1384
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 27.1 bits (57), Expect = 9.4
Identities = 24/106 (22%), Positives = 43/106 (40%)
Frame = +3
Query: 42 SILAICQGGVIDEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAG 221
++L I QG +ID G + I+ H ++ HA ++ +I HA
Sbjct: 1931 AVLIILQG-IIDHA-GIIDHAVLIILQGIIDHAVLIILQGIIDHAVLIILQG--IIDHAV 1986
Query: 222 PIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDH 359
I+ ++HS I ++ H + ++ HA + I DH
Sbjct: 1987 LIILQGIIDHSVLIILQGIIDHALLIILQGIIDHAVLIILQGIIDH 2032
>SB_34999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 420 GDHKSQHETRDG--DVVKGEYSLLQPDGSIR 506
GDH+S HE + G D+ +G ++ +P+ IR
Sbjct: 106 GDHQSHHEEKRGLQDLAQGLHACARPEKLIR 136
>SB_59101| Best HMM Match : PT (HMM E-Value=0.026)
Length = 386
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 103 EDTAWPWPSSITPPWQ 56
++TA PW SI PWQ
Sbjct: 302 QNTAQPWQQSIAQPWQ 317
>SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = -1
Query: 164 YWGIMCRCLMRRLVMANDALGRHSMAVALVYNTTLANSQNRADYSNFEEH 15
Y G+MC + + +D RH M + L+ ++ ++R D N +
Sbjct: 187 YIGVMCDRCSHKAIRKSDRENRHDMELPLLLPPRNSSKRSRHDNKNITHY 236
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 352 PIMSKIMLPRSMSSHIP-SRIPTPAITSPNTKPVMVMS*KAN 474
P S+ +PR +S S IP PAI P T+P M AN
Sbjct: 424 PPQSRQAVPRHRTSATADSSIPAPAIGRPTTRPGMERPGTAN 465
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -3
Query: 333 ESQRGARLEHVAQG*SVGLLAKHVYTKNV 247
+SQ GA VAQG +VGL A Y NV
Sbjct: 189 QSQGGASTAPVAQGGAVGLPANEQYQGNV 217
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = +3
Query: 204 LIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAK 383
L QH G H+ S Y H + + +S + +P H +P+ V +D + H+
Sbjct: 667 LSQHEGLKRHSL----SLYKHMAAFIMAYSFTEDSPSFHGNNVPVMVPMADILNHHSNNN 722
Query: 384 YEFSYSVEDPHTGDHKSQHETRDGDV 461
+ E+ +QH + G+V
Sbjct: 723 ARLEFGEEE--LSMVSTQHILKGGEV 746
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,422,876
Number of Sequences: 59808
Number of extensions: 479279
Number of successful extensions: 3887
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 3325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3781
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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