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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...   115   1e-27
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...   108   1e-25
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...   108   1e-25
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...   106   5e-25
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...   106   5e-25
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...   106   5e-25
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...   101   2e-23
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...   100   3e-23
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...   100   3e-23
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...   100   3e-23
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...   100   3e-23
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...   100   3e-23
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    99   1e-22
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    55   2e-09
EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle...    36   0.001
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    24   3.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   4.7  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    23   8.2  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   8.2  

>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score =  115 bits (276), Expect = 1e-27
 Identities = 75/177 (42%), Positives = 100/177 (56%), Gaps = 9/177 (5%)
 Frame = +3

Query: 15  MFFKIAVVCSILAICQGGVIDEGH-GHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLT 191
           M FK  ++ +++A    G++   H G   +S S ++H         H  P + H   V  
Sbjct: 1   MAFKFVLLATLVAAASAGLLPVAHHGSIATSHSTIQH---------HAAPAIQHVGSV-- 49

Query: 192 HAAPLI-QHAGPIV--HAAPVEHSSYIHASPVV-QHFSPV--QH-AP-VVHHAAIPIAVE 347
           HAAP I QH+ P +  H+AP   + Y H++P + QH +P   QH AP +V   A P  ++
Sbjct: 50  HAAPAIYQHSAPAIYQHSAP---AIYQHSAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIK 106

Query: 348 HSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGSIRKVEY 518
             +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  DG  R V+Y
Sbjct: 107 SVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDY 160



 Score = 53.2 bits (122), Expect = 5e-09
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIH 266
           H V +Q  V     +H   AH T    HAAP+  ++AP+  HA PI H AAP+ H    H
Sbjct: 186 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAH----H 240

Query: 267 ASPVVQHFSPVQHAP--VVHH 323
           A+P+    S + H P  + HH
Sbjct: 241 AAPIAHSTSSIVHGPSHLSHH 261



 Score = 48.4 bits (110), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H +AP+ H    HA+P+  
Sbjct: 177 SAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAH----HAAPIA- 231

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 232 HYA----APIAHHAA-PIA--HSTSSIVHGPS 256


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score =  108 bits (259), Expect = 1e-25
 Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
 Frame = +3

Query: 147 AHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVV-QHFSPVQHAPVVHH 323
           AH+  + +  + +  HAAP IQH G  VHAAP   + Y H++P + QH +P     +V  
Sbjct: 23  AHHGSIATSHSTIQHHAAPTIQHVGS-VHAAP---AIYQHSAPAIYQHSAPA----IVKT 74

Query: 324 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGSI 503
            A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  DG  
Sbjct: 75  IAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHH 131

Query: 504 RKVEY 518
           R V+Y
Sbjct: 132 RIVDY 136



 Score = 53.2 bits (122), Expect = 5e-09
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIH 266
           H V +Q  V     +H   AH T    HAAP+  ++AP+  HA PI H AAP+ H    H
Sbjct: 162 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAH----H 216

Query: 267 ASPVVQHFSPVQHAP--VVHH 323
           A+P+    S + H P  + HH
Sbjct: 217 AAPIAHSTSSIVHGPSHLSHH 237



 Score = 48.4 bits (110), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H +AP+ H    HA+P+  
Sbjct: 153 SAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAH----HAAPIA- 207

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 208 HYA----APIAHHAA-PIA--HSTSSIVHGPS 232


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score =  108 bits (259), Expect = 1e-25
 Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
 Frame = +3

Query: 147 AHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVV-QHFSPVQHAPVVHH 323
           AH+  + +  + +  HAAP IQH G  VHAAP   + Y H++P + QH +P     +V  
Sbjct: 23  AHHGSIATSHSTIQHHAAPTIQHVGS-VHAAP---AIYQHSAPAIYQHSAPA----IVKT 74

Query: 324 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGSI 503
            A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  DG  
Sbjct: 75  IAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQ 131

Query: 504 RKVEY 518
           R V+Y
Sbjct: 132 RIVDY 136



 Score = 52.8 bits (121), Expect = 7e-09
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +3

Query: 132 SHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQHFSPVQHA 308
           +H   AH T    HAAP+  ++AP+  HA PI H AAP+ H    HA+P+    S + H 
Sbjct: 175 AHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAH----HAAPIAHSTSSIVHG 230

Query: 309 P--VVHH 323
           P  + HH
Sbjct: 231 PSHLSHH 237



 Score = 48.8 bits (111), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H +AP+ H    HA+P+  
Sbjct: 153 SAVKIAQPVHKVIAQPVDVSSYAHAPVAHATVQHHHAAPIAHYSAPIAH----HAAPIA- 207

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 208 HYA----APIAHHAA-PIA--HSTSSIVHGPS 232


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score =  106 bits (254), Expect = 5e-25
 Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = +3

Query: 147 AHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVV-QHFSPVQHAPVVHH 323
           AH+  + +  + +  HAAP I H G  VHAAP   + Y H++P + QH +P     +V  
Sbjct: 23  AHHGSIATSHSTIQHHAAPAIHHVGS-VHAAP---AIYQHSAPAIYQHSAPA----IVKT 74

Query: 324 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGSI 503
            A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  DG  
Sbjct: 75  IAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQ 131

Query: 504 RKVEY 518
           R V+Y
Sbjct: 132 RIVDY 136



 Score = 48.4 bits (110), Expect = 1e-07
 Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIV-HAAPVEH--SSY 260
           H V +Q  V     +H   AH T    HAAP+  +AAP+  HA PI  HAAP+ H  SS 
Sbjct: 162 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSI 220

Query: 261 IHASPVVQH 287
           +H    + H
Sbjct: 221 VHGPSHLSH 229



 Score = 47.6 bits (108), Expect = 3e-07
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H AAP+ H    HA+P+  
Sbjct: 153 SAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAH----HAAPIAH 208

Query: 285 HFSPVQH--APVVH 320
           H +P+ H  + +VH
Sbjct: 209 HAAPIAHSTSSIVH 222



 Score = 34.7 bits (76), Expect = 0.002
 Identities = 40/126 (31%), Positives = 48/126 (38%), Gaps = 11/126 (8%)
 Frame = +3

Query: 84  HGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAP-LIQHAGPI--VHAAPVEHS 254
           HG  V  Q  +  D   HQ    Y          +    P  ++ A P+  V A PV  S
Sbjct: 114 HGDEVHGQYSLL-DSDGHQRIVDYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVHVS 172

Query: 255 SYIHASPVVQHFSPVQHAPVVHHAAIPIA------VEHSDHVEDH-APAKYEFSYSVEDP 413
           SY HA        PV HA V HH A PIA        H+  +  H AP  +  S  V  P
Sbjct: 173 SYAHA--------PVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGP 224

Query: 414 -HTGDH 428
            H   H
Sbjct: 225 SHLSHH 230


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score =  106 bits (254), Expect = 5e-25
 Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = +3

Query: 147 AHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVV-QHFSPVQHAPVVHH 323
           AH+  + +  + +  HAAP I H G  VHAAP   + Y H++P + QH +P     +V  
Sbjct: 23  AHHGSIATSHSSIQHHAAPAIHHVGS-VHAAP---AIYQHSAPAIYQHSAPA----IVKT 74

Query: 324 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGSI 503
            A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  DG  
Sbjct: 75  IAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQ 131

Query: 504 RKVEY 518
           R V+Y
Sbjct: 132 RIVDY 136



 Score = 53.2 bits (122), Expect = 5e-09
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIH 266
           H V +Q  V     +H   AH T    HAAP+  ++AP+  HA PI H AAP+ H    H
Sbjct: 162 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAH----H 216

Query: 267 ASPVVQHFSPVQHAP--VVHH 323
           A+P+    S + H P  + HH
Sbjct: 217 AAPIAHSTSSIVHGPSHLSHH 237



 Score = 48.4 bits (110), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H +AP+ H    HA+P+  
Sbjct: 153 SAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAH----HAAPIA- 207

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 208 HYA----APIAHHAA-PIA--HSTSSIVHGPS 232


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score =  106 bits (254), Expect = 5e-25
 Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = +3

Query: 147 AHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVV-QHFSPVQHAPVVHH 323
           AH+  + +  + +  HAAP I H G  VHAAP   + Y H++P + QH +P     +V  
Sbjct: 23  AHHGSIATSHSTIQHHAAPAIHHVGS-VHAAP---AIYQHSAPAIYQHSAPA----IVKT 74

Query: 324 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGSI 503
            A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  DG  
Sbjct: 75  IAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQ 131

Query: 504 RKVEY 518
           R V+Y
Sbjct: 132 RIVDY 136



 Score = 48.4 bits (110), Expect = 1e-07
 Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIV-HAAPVEH--SSY 260
           H V +Q  V     +H   AH T    HAAP+  +AAP+  HA PI  HAAP+ H  SS 
Sbjct: 162 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSI 220

Query: 261 IHASPVVQH 287
           +H    + H
Sbjct: 221 VHGPSHLSH 229



 Score = 46.8 bits (106), Expect = 4e-07
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+   P H+  A    V S+A   + HA     HA PI H AAP+ H    HA+P+  
Sbjct: 153 SAVKIAHPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAH----HAAPIAH 208

Query: 285 HFSPVQH--APVVH 320
           H +P+ H  + +VH
Sbjct: 209 HAAPIAHSTSSIVH 222



 Score = 34.7 bits (76), Expect = 0.002
 Identities = 40/126 (31%), Positives = 48/126 (38%), Gaps = 11/126 (8%)
 Frame = +3

Query: 84  HGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAP-LIQHAGPI--VHAAPVEHS 254
           HG  V  Q  +  D   HQ    Y          +    P  ++ A P+  V A PV  S
Sbjct: 114 HGDEVHGQYSLL-DSDGHQRIVDYHADHHTGFNAVVRREPSAVKIAHPVHKVIAQPVHVS 172

Query: 255 SYIHASPVVQHFSPVQHAPVVHHAAIPIA------VEHSDHVEDH-APAKYEFSYSVEDP 413
           SY HA        PV HA V HH A PIA        H+  +  H AP  +  S  V  P
Sbjct: 173 SYAHA--------PVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGP 224

Query: 414 -HTGDH 428
            H   H
Sbjct: 225 SHLSHH 230


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score =  101 bits (241), Expect = 2e-23
 Identities = 56/115 (48%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
 Frame = +3

Query: 180 PVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVV-QHFSPVQHAPVVHHAAIPIAVEHS 353
           PV  H +    H+    HAAP + H   IHA+P + QH +P     +V   A P  ++  
Sbjct: 21  PVANHGSIATSHSSIQHHAAPAIHHVGSIHAAPAIYQHSAPT----IVKTIAQPTIIKSV 76

Query: 354 DHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGSIRKVEY 518
           +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  DG  R V+Y
Sbjct: 77  EH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDY 128



 Score = 54.4 bits (125), Expect = 2e-09
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIH 266
           H V +Q  V     +H   AH T    HAAP+  +AAP+  HA PI H AAP+ H    H
Sbjct: 154 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPIAHYAAPIAH----H 208

Query: 267 ASPVVQHFSPVQHAP--VVHH 323
           A+P+    S + H P  + HH
Sbjct: 209 AAPIAHSTSSIVHGPSHLSHH 229



 Score = 49.6 bits (113), Expect = 6e-08
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H AAP+ H    HA+P+  
Sbjct: 145 SAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAH----HAAPIA- 199

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 200 HYA----APIAHHAA-PIA--HSTSSIVHGPS 224


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score =  100 bits (240), Expect = 3e-23
 Identities = 60/128 (46%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
 Frame = +3

Query: 141 ATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVV-QHFSPVQHAPV 314
           A+A   PV  H +   +H+   IQH     HAAP + H   +HA+P + QH +P     +
Sbjct: 15  ASAGLLPVAHHGSIATSHST--IQH-----HAAPAIHHVGSVHAAPAIYQHSAPA----I 63

Query: 315 VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPD 494
           V   A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  D
Sbjct: 64  VKTIAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSD 120

Query: 495 GSIRKVEY 518
           G  R V+Y
Sbjct: 121 GHQRIVDY 128



 Score = 54.0 bits (124), Expect = 3e-09
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIH 266
           H V +Q+ V     +H   AH T    HAAP+  ++AP+  HA PI H AAP+ H    H
Sbjct: 154 HKVIAQN-VHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAH----H 208

Query: 267 ASPVVQHFSPVQHAP--VVHH 323
           A+P+    S + H P  + HH
Sbjct: 209 AAPIAHSTSSIVHGPSHLSHH 229



 Score = 48.8 bits (111), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H +AP+ H    HA+P+  
Sbjct: 145 SAVKIAQPVHKVIAQNVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAH----HAAPIA- 199

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 200 HYA----APIAHHAA-PIA--HSTSSIVHGPS 224


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score =  100 bits (240), Expect = 3e-23
 Identities = 60/128 (46%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
 Frame = +3

Query: 141 ATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVV-QHFSPVQHAPV 314
           A+A   PV  H +   +H+   IQH     HAAP + H   +HA+P + QH +P     +
Sbjct: 15  ASAGLLPVAHHGSIATSHST--IQH-----HAAPAIHHVGSVHAAPAIYQHSAPA----I 63

Query: 315 VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPD 494
           V   A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  D
Sbjct: 64  VKTIAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSD 120

Query: 495 GSIRKVEY 518
           G  R V+Y
Sbjct: 121 GHQRIVDY 128



 Score = 54.4 bits (125), Expect = 2e-09
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIH 266
           H V +Q  V     +H   AH T    HAAP+  +AAP+  HA PI H AAP+ H    H
Sbjct: 154 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPIAHYAAPIAH----H 208

Query: 267 ASPVVQHFSPVQHAP--VVHH 323
           A+P+    S + H P  + HH
Sbjct: 209 AAPIAHSTSSIVHGPSHLSHH 229



 Score = 49.6 bits (113), Expect = 6e-08
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H AAP+ H    HA+P+  
Sbjct: 145 SAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAH----HAAPIA- 199

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 200 HYA----APIAHHAA-PIA--HSTSSIVHGPS 224


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score =  100 bits (240), Expect = 3e-23
 Identities = 60/128 (46%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
 Frame = +3

Query: 141 ATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVV-QHFSPVQHAPV 314
           A+A   PV  H +   +H+   IQH     HAAP + H   +HA+P + QH +P     +
Sbjct: 15  ASAGLLPVAHHGSIATSHST--IQH-----HAAPAIHHVGSVHAAPAIYQHSAPA----I 63

Query: 315 VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPD 494
           V   A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  D
Sbjct: 64  VKTIAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSD 120

Query: 495 GSIRKVEY 518
           G  R V+Y
Sbjct: 121 GHQRIVDY 128



 Score = 54.4 bits (125), Expect = 2e-09
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIH 266
           H V +Q  V     +H   AH T    HAAP+  +AAP+  HA PI H AAP+ H    H
Sbjct: 154 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPIAHYAAPIAH----H 208

Query: 267 ASPVVQHFSPVQHAP--VVHH 323
           A+P+    S + H P  + HH
Sbjct: 209 AAPIAHSTSSIVHGPSHLSHH 229



 Score = 49.6 bits (113), Expect = 6e-08
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H AAP+ H    HA+P+  
Sbjct: 145 SAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAH----HAAPIA- 199

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 200 HYA----APIAHHAA-PIA--HSTSSIVHGPS 224


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score =  100 bits (239), Expect = 3e-23
 Identities = 60/128 (46%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
 Frame = +3

Query: 141 ATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVV-QHFSPVQHAPV 314
           A+A   PV  H +   +H+   IQH     HAAP ++H   +HA P + QH +P     +
Sbjct: 15  ASAGLLPVAHHGSIATSHST--IQH-----HAAPAIQHVGSVHALPAIYQHSAPA----I 63

Query: 315 VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPD 494
           V   A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  D
Sbjct: 64  VKTIAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSD 120

Query: 495 GSIRKVEY 518
           G  R V+Y
Sbjct: 121 GHQRIVDY 128



 Score = 42.3 bits (95), Expect = 9e-06
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = +3

Query: 84  HGHAVSSQSIVRHDEPS---HQATA---HYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPV 245
           H HA  + + V+H   +   H +     H  P+  +AAP+  HAAP+  HA PI H+   
Sbjct: 162 HVHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHHAAPIAHHAAPIAHST-- 219

Query: 246 EHSSYIHASPVVQH 287
             SS +H    + H
Sbjct: 220 --SSIVHGPSHLSH 231



 Score = 39.1 bits (87), Expect = 9e-05
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = +3

Query: 195 AAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPV-QHAPVVHHAAIPIAVEHSDHVEDH 371
           A P+  HA P+ HA    H    HA+P+  + +P+  HA  + H A PIA  H+  +  H
Sbjct: 158 AQPVHVHA-PVAHATVQHH----HAAPIAHYSAPIAHHAAPIAHYAAPIA-HHAAPIAHH 211

Query: 372 -APAKYEFSYSVEDP-HTGDH 428
            AP  +  S  V  P H   H
Sbjct: 212 AAPIAHSTSSIVHGPSHLSHH 232



 Score = 33.1 bits (72), Expect = 0.006
 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
 Frame = +3

Query: 72  IDEGHGHAVSSQSIVRHDEPSH------QATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH 233
           + + H   + SQ   RH +  H       +  H   V  HA       A + +    +  
Sbjct: 90  VHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRREPSAVKI 149

Query: 234 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHA 374
           A PV     + A PV  H +PV HA V HH A PIA  +S  +  HA
Sbjct: 150 AQPVHK---VIAQPVHVH-APVAHATVQHHHAAPIA-HYSAPIAHHA 191


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score =  100 bits (239), Expect = 3e-23
 Identities = 60/128 (46%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
 Frame = +3

Query: 141 ATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVV-QHFSPVQHAPV 314
           A+A   PV  H +   +H+   IQH     HAAP + H   +HA+P + QH +P     +
Sbjct: 15  ASAGLLPVAHHGSIASSHST--IQH-----HAAPAIHHVGSVHAAPAIYQHSAPA----I 63

Query: 315 VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPD 494
           V   A P  ++  +H   HAPA YEFSYSV D HTGD KSQHETR GD V G+YSLL  D
Sbjct: 64  VKTIAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSD 120

Query: 495 GSIRKVEY 518
           G  R V+Y
Sbjct: 121 GHQRIVDY 128



 Score = 53.2 bits (122), Expect = 5e-09
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIH 266
           H V +Q  V     +H   AH T    HAAP+  ++AP+  HA PI H AAP+ H    H
Sbjct: 154 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAH----H 208

Query: 267 ASPVVQHFSPVQHAP--VVHH 323
           A+P+    S + H P  + HH
Sbjct: 209 AAPIAHSTSSIVHGPSHLSHH 229



 Score = 48.4 bits (110), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H +AP+ H    HA+P+  
Sbjct: 145 SAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAH----HAAPIA- 199

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 200 HYA----APIAHHAA-PIA--HSTSSIVHGPS 224


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 98.7 bits (235), Expect = 1e-22
 Identities = 59/128 (46%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
 Frame = +3

Query: 141 ATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVV-QHFSPVQHAPV 314
           A+A   PV  H +   +H+   IQH     HA P ++H   IHA+P + QH +P     +
Sbjct: 15  ASAGLLPVAHHGSIATSHST--IQH-----HARPAIQHVGSIHAAPAIYQHSAPA----I 63

Query: 315 VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKGEYSLLQPD 494
           V   A P  ++  +H   HAPA YEFSYSV D HTGD K+QHETR GD V G+YSLL  D
Sbjct: 64  VKTIAQPTIIKSVEH---HAPANYEFSYSVHDEHTGDIKNQHETRHGDEVHGQYSLLDSD 120

Query: 495 GSIRKVEY 518
           G  R V+Y
Sbjct: 121 GHQRIVDY 128



 Score = 53.2 bits (122), Expect = 5e-09
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +3

Query: 90  HAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIH 266
           H V +Q  V     +H   AH T    HAAP+  ++AP+  HA PI H AAP+ H    H
Sbjct: 154 HKVIAQP-VHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPITHYAAPIAH----H 208

Query: 267 ASPVVQHFSPVQHAP--VVHH 323
           A+P+    S + H P  + HH
Sbjct: 209 AAPIAHSTSSIVHGPSHLSHH 229



 Score = 48.4 bits (110), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 108 SIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVH-AAPVEHSSYIHASPVVQ 284
           S V+  +P H+  A    V S+A   + HA     HA PI H +AP+ H    HA+P+  
Sbjct: 145 SAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAH----HAAPIT- 199

Query: 285 HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 380
           H++    AP+ HHAA PIA  HS     H P+
Sbjct: 200 HYA----APIAHHAA-PIA--HSTSSIVHGPS 224


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 54.8 bits (126), Expect = 2e-09
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +3

Query: 417 TGDHKSQHETRDGDVVKGEYSLLQPDGSIRKVEYT 521
           TGD KSQ E+RDGDVV+G YS++ PDG+ R V+YT
Sbjct: 34  TGDSKSQQESRDGDVVQGSYSVVDPDGTKRTVDYT 68


>EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle
           protein protein.
          Length = 178

 Score = 35.5 bits (78), Expect = 0.001
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
 Frame = +3

Query: 87  GHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIH 266
           G+A ++ + V++  P++   AHY     H      +AAP + +     +AAP  H  Y  
Sbjct: 77  GYAYAAPA-VKYAAPAY--AAHYAAPAVHYPAAAHYAAPAVHYPAAAHYAAPAVH--YAA 131

Query: 267 ASPVVQHFSPVQH-APVVHHA--AIPIAVEHSDHVEDHA 374
            +P+V+   P  + AP+ +    A P+A  H   V   A
Sbjct: 132 HAPIVKAAYPAAYAAPLAYKTPLAAPVAAVHGGSVVQFA 170



 Score = 30.7 bits (66), Expect = 0.031
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
 Frame = +3

Query: 15  MFFKIAVVCSILAICQGGVIDEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTH 194
           M FK  ++ +++A    G      G A  S +    D  S  A+  +T    +   VL+ 
Sbjct: 1   MAFKFVILAALVAAVSAG------GPAAYSIAAPSADFHSVGASHEHTVKGLYGQNVLSQ 54

Query: 195 AAPLIQ--HAGPIVHAAPVEHSSYIHASPVVQHFSP--VQH--APVVHHAA 329
            +  +   H+   VH++ + +  Y +A+P V++ +P    H  AP VH+ A
Sbjct: 55  YSKAVDSAHSSVRVHSSRLSNDGYAYAAPAVKYAAPAYAAHYAAPAVHYPA 105



 Score = 28.3 bits (60), Expect = 0.17
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = +3

Query: 213 HAGPIV-HAAPVEHSSYIHASPVVQHFSPVQH--APVVHHAAIPIAVEHSDHVEDHAP-- 377
           +A P V +AAP   + Y  A+P V H+    H  AP VH+ A       + H   HAP  
Sbjct: 80  YAAPAVKYAAPAYAAHY--AAPAV-HYPAAAHYAAPAVHYPAAAHYAAPAVHYAAHAPIV 136

Query: 378 -AKYEFSYS 401
            A Y  +Y+
Sbjct: 137 KAAYPAAYA 145


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 304 MLQSCTTLRFQLPSNTPIMS---KIMLPRSMSSHIPSRIPTPAITSPN 438
           +L+   T  +++P  +  +    KIM+P     H P   P PA   P+
Sbjct: 383 ILERIVTKPYRIPDTSVTLHPGMKIMIPAYAIHHDPDIYPEPATYDPD 430


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/49 (22%), Positives = 18/49 (36%)
 Frame = -3

Query: 516  IRPCGWNHQAGVESIRLSRHHHHGFRVGTCDRRCGDPRRNMRTHTSREH 370
            I P   +HQA   +       HH   V           +  R+ +S++H
Sbjct: 859  ITPPSTHHQAAAVAAHHHHLQHHAAMVAAAAAAAASQEQQQRSSSSQQH 907


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 313 TGACCTGLKCW 281
           +G CCT  +CW
Sbjct: 47  SGVCCTVPRCW 57


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 354 DHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDV 461
           + + DH PA  EFS   +D     H   H+ R+ D+
Sbjct: 479 EQLTDHIPAPDEFSLLAQDGTPFQH--LHQLRELDL 512


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,253
Number of Sequences: 2352
Number of extensions: 16294
Number of successful extensions: 413
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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