Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302H12f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 38 0.005
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 35 0.038
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 0.62
At5g29070.1 68418.m03617 expressed protein 30 0.82
At5g41100.2 68418.m04997 expressed protein 29 1.4
At5g41100.1 68418.m04996 expressed protein 29 1.4
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 1.4
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 29 2.5
At3g53140.1 68416.m05856 O-diphenol-O-methyl transferase, putati... 29 2.5
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 28 3.3
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 28 3.3
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 28 3.3
At5g31873.1 68418.m03777 hypothetical protein 28 4.4
At5g28120.1 68418.m03396 hypothetical protein 28 4.4
At5g28110.1 68418.m03395 hypothetical protein 28 4.4
At3g30816.1 68416.m03949 hypothetical protein 28 4.4
At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit... 27 5.8
At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit... 27 5.8
At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit... 27 5.8
At5g07790.1 68418.m00892 expressed protein 27 7.7
At4g35870.1 68417.m05094 expressed protein 27 7.7
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 27 7.7
At3g44700.1 68416.m04807 expressed protein contains Pfam profile... 27 7.7
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 27 7.7
At2g34910.1 68415.m04286 expressed protein 27 7.7
At1g06330.1 68414.m00669 copper-binding family protein similar t... 27 7.7
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 114 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHA-APVEH-SSYIHASPVVQH 287
VRH P +H +P +SH++P + ++P + H+ P+V A +PV+ SS +SP
Sbjct: 165 VRHSSPP---VSHSSPPVSHSSPPTSRSSPAVSHSSPVVAASSPVKAVSSSTASSPRAAS 221
Query: 288 FSP 296
SP
Sbjct: 222 PSP 224
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 34.7 bits (76), Expect = 0.038
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +3
Query: 138 QATAHYTPVLSHAAPVLTHAAPLIQHAGP--IVHAAPV--EHSSYIHASPVVQHFS--PV 299
Q+TA+Y S P + H P ++H P + H+ P +H Y P V+H+S PV
Sbjct: 24 QSTANY--FYSSPPPPVKHYTPPVKHYSPPPVYHSPPPPKKHYEYKSPPPPVKHYSPPPV 81
Query: 300 QHAP 311
H+P
Sbjct: 82 YHSP 85
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 75 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 134
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 135 PPVYHSP 141
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 103 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 162
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 163 PPVYHSP 169
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 131 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 190
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 191 PPVYHSP 197
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 159 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 218
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 219 PPVYHSP 225
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 187 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 246
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 247 PPVYHSP 253
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 215 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 274
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 275 PPVYHSP 281
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 243 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 302
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 303 PPVYHSP 309
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 271 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 330
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 331 PPVYHSP 337
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 299 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 358
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 359 PPVYHSP 365
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 150 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 293
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 327 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 386
Query: 294 -PVQHAP 311
PV H+P
Sbjct: 387 PPVYHSP 393
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Frame = +3
Query: 201 PLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS--PVQHAP 311
P ++H P + H+ P Y++ SP V+H+S PV H+P
Sbjct: 71 PPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSP 113
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 334 QLPSNTPIMSKIMLPRSMSSHIPSRIPTPAI-----TSPNTKPV 450
Q P+ + S++ P S S+ PS+ PTP + +PN+KPV
Sbjct: 726 QAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPV 769
>At5g29070.1 68418.m03617 expressed protein
Length = 307
Score = 30.3 bits (65), Expect = 0.82
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 182 STDSRSPFDST-CRSYCSRRPRGTFFVYTCFASSPTLQPCATCSSRAPR 325
+T R P D T C S RP T T SSPT +P +CS AP+
Sbjct: 93 ATLDRRPTDWTRCGSDTQPRPWATQGATTGPESSPTCRPTGSCSVAAPQ 141
>At5g41100.2 68418.m04997 expressed protein
Length = 582
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +3
Query: 114 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFS 293
+R PS A TPV S ++P+ T H+ + H++P+E H +S
Sbjct: 346 MRQMTPSANAYILPTPVDSKSSPIFTKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYS 405
Query: 294 ----PVQHA------PVVHHAAIPIAVE 347
P +HA P +P+AV+
Sbjct: 406 RLPRPSEHAFSGPLKPSSTRLPVPVAVQ 433
>At5g41100.1 68418.m04996 expressed protein
Length = 586
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +3
Query: 114 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFS 293
+R PS A TPV S ++P+ T H+ + H++P+E H +S
Sbjct: 346 MRQMTPSANAYILPTPVDSKSSPIFTKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYS 405
Query: 294 ----PVQHA------PVVHHAAIPIAVE 347
P +HA P +P+AV+
Sbjct: 406 RLPRPSEHAFSGPLKPSSTRLPVPVAVQ 433
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 189 THAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIP 335
T P H+ P +P Y ++SP H SP H+P H+ P
Sbjct: 535 TRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPP 583
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 349 TPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KANTLYSSLMVPSARSNT 519
+PI S P + S+ S +PA+TSP T P + A++ S P+ S +
Sbjct: 23 SPISSPTKSPTTPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPAPVSES 79
>At3g53140.1 68416.m05856 O-diphenol-O-methyl transferase, putative
similar to GI:6688808 [Medicago sativa subsp. x varia],
caffeic acid O-methyltransferase (homt1), Populus
kitakamiensis, EMBL:PKHOMT1A
Length = 359
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 165 LSHAAPVLTHAAPLIQHAGPIVHAAPVE 248
LS+AA VL H + A P+VH A VE
Sbjct: 115 LSYAAYVLQHHQEALMRAWPLVHTAVVE 142
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +3
Query: 129 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVVQHFSPVQH 305
P+ + PV S A H + + P ++ P +HSSY H S
Sbjct: 61 PNPNPPQYTRPVTSPATQQQQHLSQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLSSSS 120
Query: 306 APVVHHAAIPIAVEHSDHVEDHAPA 380
AP +++PI+ + + PA
Sbjct: 121 APASSSSSLPISGQQRGGMAIGVPA 145
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 150 HYTP--VLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS----YIHASPVVQHFSPVQHAP 311
HY+P V P + H +P + P PV+H S Y P V+H+SP
Sbjct: 108 HYSPPPVYKSPPPPVKHYSPPPVYKSP---PPPVKHYSPPPVYKSPPPPVKHYSPPPSYT 164
Query: 312 VVHH 323
+HH
Sbjct: 165 TLHH 168
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 150 HYTP--VLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS----YIHASPVVQHFSPVQHAP 311
HY+P V P + H +P + P PV+H S Y P V+H+SP
Sbjct: 108 HYSPPPVYKSPPPPVKHYSPPPVYKSP---PPPVKHYSPPPVYKSPPPPVKHYSPPPSYT 164
Query: 312 VVHH 323
+HH
Sbjct: 165 TLHH 168
>At5g31873.1 68418.m03777 hypothetical protein
Length = 271
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 423 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 292
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 196 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 238
>At5g28120.1 68418.m03396 hypothetical protein
Length = 506
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 423 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 292
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 394 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 436
>At5g28110.1 68418.m03395 hypothetical protein
Length = 493
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 423 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 292
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 394 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 436
>At3g30816.1 68416.m03949 hypothetical protein
Length = 342
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 423 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 292
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 231 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 273
>At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 565
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 471 RLSRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRH-DRSVRRQLESQ 325
R SRH H G R G + R R+HD R DR RR S+
Sbjct: 99 RSSRHRDHSRERGERRERGGRDDDDYRRSRDRDHDRRRDDRGGRRSRRSR 148
>At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 542
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 471 RLSRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRH-DRSVRRQLESQ 325
R SRH H G R G + R R+HD R DR RR S+
Sbjct: 99 RSSRHRDHSRERGERRERGGRDDDDYRRSRDRDHDRRRDDRGGRRSRRSR 148
>At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 573
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 471 RLSRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRH-DRSVRRQLESQ 325
R SRH H G R G + R R+HD R DR RR S+
Sbjct: 99 RSSRHRDHSRERGERRERGGRDDDDYRRSRDRDHDRRRDDRGGRRSRRSR 148
>At5g07790.1 68418.m00892 expressed protein
Length = 616
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 369 HAPAKYEFSYSVEDPH-TGDHKSQHETRDGDVVKGEYSLLQPDGSIRK 509
H P+ F S DPH +G S+ ++ + KG S L S +K
Sbjct: 337 HCPSNKTFKGSDHDPHSSGQASSESQSNQTSMEKGSSSSLSEAKSAKK 384
>At4g35870.1 68417.m05094 expressed protein
Length = 817
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 375 EHDLRHDRSVRRQLESQRGARLEHVAQG*SVG-LLAKHVYTKN 250
+ LR + +R LESQ A E AQG V ++ K VYT N
Sbjct: 312 DEKLRKLQELRADLESQLAAYKEGRAQGAGVAFVMFKDVYTAN 354
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 286 TSALCNMLQSCTTLRF-QLPSNTPIMSKIMLPRSMSSHIPS-RIPTPAITSPNTKPV 450
T CN+ T+ ++PS I P + +P+ +PTP++ SPN PV
Sbjct: 26 TDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPV 82
>At3g44700.1 68416.m04807 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function; expression
supported by MPSS
Length = 368
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 210 ESKGLRESVLEQHDSILGYNVPLLDEKARHGERC 109
++ G+ V + HD I G +VP L +K+ GE+C
Sbjct: 15 DNGGIDIVVEKSHDLISGGSVPKLLKKSAGGEKC 48
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 514 STLRMEPSGWSREYSPFTTSP 452
+T M PS W++ YSP+ SP
Sbjct: 94 NTPSMSPSPWNQTYSPYYKSP 114
>At2g34910.1 68415.m04286 expressed protein
Length = 288
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +1
Query: 283 NTSALCNMLQSCTTLRFQLPSNTPIMS----KIMLPRSMSSHIPSRIPTPAITSPNTKP 447
N + N L TL+ Q+ + P ++ +++LP +MS + +P P + P KP
Sbjct: 32 NPNPNINFLVQKATLQNQMTVSRPSLNEESFRMVLPLAMSPPRDNAVPLPVLPEPMMKP 90
>At1g06330.1 68414.m00669 copper-binding family protein similar to
copper homeostasis factor gi:3168840 from Arabidopsis
thaliana; contains Pfam heavy-metal-associated domain
PF00403
Length = 159
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 219 GPIVHAAPVEHSSYIHASPVV--QHFSPVQHAPVVHHAAI 332
GPI HAAPV SSY + +S +H PV HA+I
Sbjct: 102 GPINHAAPVPTSSYNYYKHGYDSNDYSSYRHHPV--HASI 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,185,398
Number of Sequences: 28952
Number of extensions: 310088
Number of successful extensions: 1234
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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