Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H11f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              31   0.018
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    31   0.023
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   0.67 
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    26   0.88 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.6  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    23   6.2  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   8.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.2  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 31.5 bits (68), Expect = 0.018
 Identities = 23/111 (20%), Positives = 51/111 (45%)
 Frame = -3

Query: 336 KNHHGLW*RSKMTQKILQD*WSWRQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRW 157
           +N  G     +  Q+  Q     R+ Q Q++ Q+++   QQQ +  +Q R  + +  ++ 
Sbjct: 209 RNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQ 268

Query: 156 LEHREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTN 4
            + REQ   +++    +    ++  ++Q  +    Q +     T+V+RR N
Sbjct: 269 HQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQN 319


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 31.1 bits (67), Expect = 0.023
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -3

Query: 336 KNHHGLW*RSKMTQKILQD*WSWRQPQV--QRKLQRERSP*QQQARSTSQLRV*RGRSMR 163
           +NH     +S   Q+  Q   S +Q Q+  Q++ QR+R P  QQ  S+SQ RV    + R
Sbjct: 229 QNHQQTAQQSSQQQQQQQQQQSLQQQQLSQQQQQQRQRQPSSQQGDSSSQRRV--RHAGR 286

Query: 162 RW 157
           RW
Sbjct: 287 RW 288


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -3

Query: 267 RQPQVQRKLQRERSP*QQQARSTSQ---LRV*RGRSMRRWLEHREQ 139
           RQ Q Q + QR++ P QQQ +   Q     V RGR  +R  + ++Q
Sbjct: 208 RQQQQQCQQQRQQQPQQQQLQQPQQQLWTTVVRGRPSQRHRQPQQQ 253



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
 Frame = -3

Query: 252 QRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHR-----EQSMLRKMVIHERLWTSKK 88
           Q + QR++   QQQ +   Q R  + R  +R  + R     +Q   R+    ++    ++
Sbjct: 301 QLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQ 360

Query: 87  ILRKQLEKWSWSQPEMRHKRTMVQRR 10
             ++Q ++W   Q + +  R  +  R
Sbjct: 361 QHQQQQQQWQQQQQQQQQPRQSLPHR 386



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 15/82 (18%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = -3

Query: 267 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKK 88
           +Q + Q++ Q+++   QQQ +   Q +    +  ++W + ++Q    +  +  R  T  +
Sbjct: 333 QQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLPHRKQTQLQ 392

Query: 87  I---LRKQLEKWSWSQPEMRHK 31
           +   L++Q ++   SQ + + +
Sbjct: 393 LSPRLQQQQQQQQQSQQQQQQQ 414



 Score = 23.4 bits (48), Expect = 4.7
 Identities = 19/84 (22%), Positives = 43/84 (51%)
 Frame = -3

Query: 261 PQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKKIL 82
           PQ++++ Q+++ P QQQ +   Q +    R +   L  R+Q   R+   H++    ++  
Sbjct: 267 PQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQL--RQQ---RQQQQHQQQQQQQQQQ 321

Query: 81  RKQLEKWSWSQPEMRHKRTMVQRR 10
           R+Q ++    Q + R ++   Q++
Sbjct: 322 RQQQQRQQQRQQQQRQQQQQQQQQ 345



 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -3

Query: 267 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQ 139
           ++ Q QR+ QR++   QQQ +   Q R  + R  ++  + + Q
Sbjct: 321 QRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQ 363


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 147 REQSMLRKMVIHERLWTSKKILRKQLEKW-SWSQPEMRHKRTMVQR 13
           REQ +LR+M   +R    +++  +Q ++W    Q + R +R   Q+
Sbjct: 166 REQELLRRMESQQRQEQRQQLEDQQRQRWRQQQQKQQRQQRLPAQQ 211


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 41   ISGCDQDHFSSCF 79
            ISG  +DH+SSC+
Sbjct: 3110 ISGITEDHYSSCY 3122


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 59   DHFSSCFLSIFLLVHNRSWITIFRNILCSR 148
            DH    +L +F +   + WI I  + + SR
Sbjct: 1497 DHVGKAYLCLFQVATFKGWIQIMNDAIDSR 1526


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 15/60 (25%), Positives = 23/60 (38%)
 Frame = -3

Query: 219 QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEM 40
           QQ+     QLR+  GR+   W  + E  +            S+K    Q  +W  S P +
Sbjct: 152 QQKTIRAPQLRLRFGRTDPSWAMYNEHQLTTGQQAQPANEASEKRAPTQRLRWGRSDPAL 211


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = +2

Query: 143 SRCSSHRRILRPRYTRSCDVLRACCC*GDRSRCSLRCTCGCL 268
           SRC  HRR  +      C       C  +  +C   C  GC+
Sbjct: 19  SRCV-HRRCPKNEVYSCCAPCPQKACISEAVKCQTSCLPGCV 59


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 80  LSIFLLVHNRSWITI 124
           L IFLL  N  W+T+
Sbjct: 860 LEIFLLQQNGEWVTV 874


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,005
Number of Sequences: 2352
Number of extensions: 7692
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)