Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H10f
         (504 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314           27   6.5  
07_03_0182 - 14815467-14815488,14815604-14815943,14816860-148172...    27   6.5  
10_06_0102 + 10758601-10758948,10759051-10759257,10759349-107595...    27   8.6  
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571...    27   8.6  

>10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314
          Length = 1056

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 70  IYIN*ETNNSIGILIYGYIELQFDMHIIKLHRSLLK--IKNAIPRYSTITAL 219
           IYIN + NN  GIL      L  ++  I+L  + +   +   I RY+ +T+L
Sbjct: 359 IYINLQLNNLSGILPNTIANLSLELQSIRLGGNQISGILPKGIGRYAKLTSL 410


>07_03_0182 -
           14815467-14815488,14815604-14815943,14816860-14817220,
           14817232-14817666,14818042-14818149
          Length = 421

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 264 GYDSGRKIIAS-KTKFSKQNTRTKHDRRETNSLKYASL 374
           G D G+ I+ S K ++   + +  H R  TN LKY  L
Sbjct: 279 GTDKGKNILFSLKKRYLLAHLQAGHSRMATNILKYVDL 316


>10_06_0102 +
           10758601-10758948,10759051-10759257,10759349-10759507,
           10759617-10759709,10759913-10760008,10760457-10760724,
           10760805-10761047,10761298-10761422,10761499-10761615,
           10761705-10761779,10761886-10761942,10762035-10762139,
           10762244-10762330,10762790-10763047,10763075-10763263,
           10763418-10763528,10763640-10763729,10763814-10763990,
           10764075-10764152,10764412-10764726,10764819-10765162,
           10765304-10765541,10765631-10765998,10766106-10766316,
           10766622-10766801,10766886-10769045,10769151-10769207
          Length = 2251

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 231 IHRDTGVSPYTGYDSGRKIIASKTKFSKQNTRT 329
           I R  G+    GYD+ RKI A  TKF   N ++
Sbjct: 392 IRRFYGMEHGGGYDAWRKISAVATKFDLDNAQS 424


>02_01_0767 -
           5709733-5709789,5709845-5709871,5710374-5710449,
           5710542-5710661,5711321-5711421,5711618-5711743,
           5713504-5713596,5713694-5713816,5713889-5714032,
           5714539-5714672,5714893-5715002,5715315-5715430,
           5716438-5716572,5716650-5716820,5717545-5717709,
           5718165-5718242,5718313-5718445,5718551-5718741,
           5718842-5718914,5719001-5719056,5719142-5719300,
           5719383-5719496,5719562-5719654,5720544-5720726,
           5720801-5720878,5720966-5721052,5721135-5721216,
           5721288-5721400,5721486-5721636,5721759-5721877,
           5721966-5722163,5722377-5722442,5723837-5723957,
           5724224-5724343,5724412-5724542,5725210-5725341,
           5725418-5725519,5726231-5726437,5726510-5726626,
           5727468-5727623,5727721-5727810,5728624-5728848,
           5728969-5729091,5729202-5729284,5729459-5729618,
           5730264-5730374,5730652-5730751,5731375-5731454,
           5731752-5731847,5731961-5732110
          Length = 1991

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +1

Query: 67  DIYIN*ETNNSIGILIYGYIELQFDMHIIKLHRSLLKIKNAIPRYSTI 210
           D  IN  T  + GIL+   + L F++ I+ + R L+      P Y  +
Sbjct: 811 DTLINERTTQTYGILLEKTVHLSFEIFILVMERDLVLADVFRPLYQPL 858


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,196,915
Number of Sequences: 37544
Number of extensions: 171216
Number of successful extensions: 315
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)