Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H08f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P54136 Cluster: Arginyl-tRNA synthetase, cytoplasmic; n...    40   0.046
UniRef50_Q4SQ03 Cluster: Chromosome 7 SCAF14536, whole genome sh...    36   0.56 
UniRef50_Q27245 Cluster: Putative aminopeptidase W07G4.4; n=2; C...    35   0.98 
UniRef50_Q7R3U5 Cluster: GLP_82_25208_20250; n=1; Giardia lambli...    34   1.7  
UniRef50_Q4S8A9 Cluster: Chromosome undetermined SCAF14706, whol...    33   4.0  
UniRef50_Q54R88 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_P54136 Cluster: Arginyl-tRNA synthetase, cytoplasmic;
           n=45; Bilateria|Rep: Arginyl-tRNA synthetase,
           cytoplasmic - Homo sapiens (Human)
          Length = 660

 Score = 39.5 bits (88), Expect = 0.046
 Identities = 31/84 (36%), Positives = 45/84 (53%)
 Frame = +2

Query: 263 NPELDKLLTENEKLKHRLAILENAIKVETXXXXXXXXXXXXRTLPMLVTDTKSVESNFCI 442
           +P L++L  EN KLK+RL IL  +++ E             R  P     TK++ +   I
Sbjct: 38  SPNLEQLQEENLKLKYRLNILRKSLQAE-------------RNKP-----TKNMIN---I 76

Query: 443 LEELKNLFEVAITNAYPDLENPPI 514
           +  L+ +F  AI  AYPDLENPP+
Sbjct: 77  ISRLQEVFGHAIKAAYPDLENPPL 100


>UniRef50_Q4SQ03 Cluster: Chromosome 7 SCAF14536, whole genome
           shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 7
           SCAF14536, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 697

 Score = 35.9 bits (79), Expect = 0.56
 Identities = 26/84 (30%), Positives = 42/84 (50%)
 Frame = +2

Query: 269 ELDKLLTENEKLKHRLAILENAIKVETXXXXXXXXXXXXRTLPMLVTDTKSVESNFCILE 448
           EL+ L+ EN +LK+R  IL  A++ E                      T+   +   I +
Sbjct: 40  ELEALMEENSRLKYRFNILNRALQEER---------------------TRCGHAMVNINQ 78

Query: 449 ELKNLFEVAITNAYPDLENPPIAL 520
            L+ +F +AI  ++P+LENPP+AL
Sbjct: 79  RLQEVFGLAIRTSFPELENPPLAL 102


>UniRef50_Q27245 Cluster: Putative aminopeptidase W07G4.4; n=2;
           Caenorhabditis|Rep: Putative aminopeptidase W07G4.4 -
           Caenorhabditis elegans
          Length = 522

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -3

Query: 444 NMQKLLSTDLVSVTSIGNVRFLASFLIAAEDSVSTFMAFSRIA 316
           ++Q LLST +V  TSI +  F A  L+ ++D+V  F A  +++
Sbjct: 2   SLQSLLSTKIVRATSIADAAFDAVVLVGSQDNVQQFGAIQQVS 44


>UniRef50_Q7R3U5 Cluster: GLP_82_25208_20250; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_82_25208_20250 - Giardia lamblia
           ATCC 50803
          Length = 1652

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +2

Query: 263 NPELDKLLTENEKLKHRLAILENAIK 340
           NP++D LL ENE+LK ++  LE AI+
Sbjct: 793 NPDIDSLLAENERLKEKMQTLEIAIQ 818


>UniRef50_Q4S8A9 Cluster: Chromosome undetermined SCAF14706, whole
           genome shotgun sequence; n=3; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14706, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 822

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 242 GDLSYVG-NPELDKLLTENEKLKHRLAILENAIKVE 346
           GD+  VG +P L+ L T+NEKL++RL  L   ++ E
Sbjct: 32  GDVGVVGASPLLETLRTDNEKLRYRLVHLRRGLQAE 67


>UniRef50_Q54R88 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 513

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = +3

Query: 3   HKKSIKKVANNQPTETYASNNNK*TRIN**KSQNTSAKTVN 125
           HKK  K   NN  T T+ SNNN  T  N  K  N   K +N
Sbjct: 224 HKKETKP-RNNDETHTHNSNNNSNTNNNNKKPNNRKQKPIN 263


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,789,044
Number of Sequences: 1657284
Number of extensions: 5941262
Number of successful extensions: 15286
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15285
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)