Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.54 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   6.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 154 IRHFYT*QL*FTVLALVFCDFYQFIRVHLLLL 59
           I HF+   + FT + L+FC  + F  +HLL L
Sbjct: 166 IYHFFCAFIIFT-MHLLFCCAFIFFNMHLLFL 196



 Score = 23.8 bits (49), Expect = 0.94
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 154 IRHFYT*QL*FTVLALVFCDFYQFIRVHLLLLEAYV 47
           I +FY   + FTV  L+    Y F  +HLL   A++
Sbjct: 238 IYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFI 273


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 87  NLYEFIYYYWKHMFQLV 37
           N  E IY+YW   F +V
Sbjct: 315 NNLERIYFYWSFGFLIV 331


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 87  NLYEFIYYYWKHMFQLV 37
           N  E IY+YW   F +V
Sbjct: 315 NNLERIYFYWSFGFLIV 331


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 142 KNDGYERKEVRRANHQGRKRS 204
           KND     E RR N++  KRS
Sbjct: 132 KNDDPSYWEKRRKNNEAAKRS 152


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 87  NLYEFIYYYWKHMFQLV 37
           N  E IY+YW   F ++
Sbjct: 315 NNLERIYFYWSFGFLII 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,735
Number of Sequences: 336
Number of extensions: 1683
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)