Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H06f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0146 + 10744403-10744603,10745199-10745834,10745967-107461...    27   6.9  
07_03_1721 - 29023979-29025295                                         27   6.9  

>11_03_0146 +
           10744403-10744603,10745199-10745834,10745967-10746125,
           10746398-10747036,10748018-10748151,10748281-10748464,
           10748882-10749217,10751659-10751945,10752863-10753253,
           10753351-10753615,10753740-10753818,10754123-10754543
          Length = 1243

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 435 NIQ*TLGEMNPNDTENESPHRHSPLSFSP 349
           ++Q T  ++NPND+E++   +H   + SP
Sbjct: 403 DVQFTSADINPNDSEDQQQQQHHGCNGSP 431


>07_03_1721 - 29023979-29025295
          Length = 438

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 508 PFECHWSPTWHTKVIMSISVTKAPEYPVDSGRDES 404
           PF   WSP W+    M+  V  AP  P +S  + S
Sbjct: 248 PFVYPWSPAWNGIPAMAPPVCTAPAEPANSSDNGS 282


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,209,255
Number of Sequences: 37544
Number of extensions: 246820
Number of successful extensions: 540
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)