Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H05f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    25   1.2  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    24   2.7  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   3.6  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
 Frame = +1

Query: 67  YGVKVVIKDMNGKDM--PFEVSFKASGIVDYNNV-LKHMATGGSSLNAPTDTIQCIDIVL 237
           YG  V +  ++G D+    + SF       YN   +  M         P + +Q IDIV 
Sbjct: 421 YGSSVDMIKLSGADLWSAIDHSFTLDDEFRYNTAQVSGMTVVADLSKKPYERVQSIDIVG 480

Query: 238 KQGTLESYVKAGRQYFMRPASPIDLGDGLEM 330
             G   +  K    Y   P+   D  DG  M
Sbjct: 481 ANGAKTALKKDQIYYVAVPSYLADGKDGFAM 511


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 386 STLMKAFDVNIADWNKPVHISSP 318
           +T+    D    DW+KP HI  P
Sbjct: 220 ATIADPDDTKPEDWDKPEHIPDP 242


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 275 LPAFTYDSNVPCFNTMSIHCMVSVGALRDDPPV 177
           L AFT +   PC +   +H   ++  LR   PV
Sbjct: 797 LAAFTPNIGGPCSSIRRLHANCAISVLRYGAPV 829


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,363
Number of Sequences: 2352
Number of extensions: 14147
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)