BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302H05f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL139286-4|CAI22804.1| 857|Homo sapiens eukaryotic translation ... 75 2e-13
AL139286-3|CAI22803.1| 782|Homo sapiens eukaryotic translation ... 75 2e-13
AF093097-1|AAF00068.1| 857|Homo sapiens putative RNA-binding pr... 75 2e-13
BC063275-1|AAH63275.1| 857|Homo sapiens eukaryotic translation ... 73 5e-13
BC125213-1|AAI25214.1| 808|Homo sapiens EIF2C2 protein protein. 69 8e-12
AY077717-1|AAL76093.1| 851|Homo sapiens eukaryotic initiation f... 69 8e-12
AL139286-2|CAI22802.1| 860|Homo sapiens eukaryotic translation ... 68 2e-11
AL138787-5|CAI22268.1| 860|Homo sapiens eukaryotic translation ... 68 2e-11
AK022827-1|BAB14262.1| 860|Homo sapiens protein ( Homo sapiens ... 68 2e-11
AL359186-1|CAH71584.1| 861|Homo sapiens eukaryotic translation ... 66 7e-11
AL354864-1|CAH73806.1| 861|Homo sapiens eukaryotic translation ... 66 7e-11
AB046787-1|BAB13393.1| 924|Homo sapiens KIAA1567 protein protein. 66 7e-11
AL139286-1|CAI22801.1| 229|Homo sapiens eukaryotic translation ... 57 4e-08
AK027796-1|BAB55374.1| 229|Homo sapiens protein ( Homo sapiens ... 55 1e-07
BC066888-1|AAH66888.1| 229|Homo sapiens EIF2C3 protein protein. 55 2e-07
>AL139286-4|CAI22804.1| 857|Homo sapiens eukaryotic translation
initiation factor 2C, 1 protein.
Length = 857
Score = 74.5 bits (175), Expect = 2e-13
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D KN Y++T LP I ER +V I GKD F+VS K IV + + H A
Sbjct: 92 YDGKKNIYTVTALP-IGNERVDFEVTIPG-EGKDRIFKVSIKWLAIVSWR--MLHEALVS 147
Query: 187 SSLNAPTDTIQCIDIVLKQGTLESYVKAGRQYFMRPASPID-LGDGLEMWTGLFQSAIFT 363
+ P +++Q +D+ ++ Y GR +F P LG G E+W G QS
Sbjct: 148 GQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPA 207
Query: 364 S-KAFINVDVAHKGFPKNQPMIDAFTRDFRLDPNRPMDRQTRPV 492
K +N+DV+ F K QP+I+ + R +D Q +P+
Sbjct: 208 MWKMMLNIDVSATAFYKAQPVIEFMCEVLDI---RNIDEQPKPL 248
>AL139286-3|CAI22803.1| 782|Homo sapiens eukaryotic translation
initiation factor 2C, 1 protein.
Length = 782
Score = 74.5 bits (175), Expect = 2e-13
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D KN Y++T LP I ER +V I GKD F+VS K IV + + H A
Sbjct: 17 YDGKKNIYTVTALP-IGNERVDFEVTIPG-EGKDRIFKVSIKWLAIVSWR--MLHEALVS 72
Query: 187 SSLNAPTDTIQCIDIVLKQGTLESYVKAGRQYFMRPASPID-LGDGLEMWTGLFQSAIFT 363
+ P +++Q +D+ ++ Y GR +F P LG G E+W G QS
Sbjct: 73 GQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPA 132
Query: 364 S-KAFINVDVAHKGFPKNQPMIDAFTRDFRLDPNRPMDRQTRPV 492
K +N+DV+ F K QP+I+ + R +D Q +P+
Sbjct: 133 MWKMMLNIDVSATAFYKAQPVIEFMCEVLDI---RNIDEQPKPL 173
>AF093097-1|AAF00068.1| 857|Homo sapiens putative RNA-binding
protein Q99 protein.
Length = 857
Score = 74.5 bits (175), Expect = 2e-13
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D KN Y++T LP I ER +V I GKD F+VS K IV + + H A
Sbjct: 92 YDGKKNIYTVTALP-IGNERVDFEVTIPG-EGKDRIFKVSIKWLAIVSWR--MLHEALVS 147
Query: 187 SSLNAPTDTIQCIDIVLKQGTLESYVKAGRQYFMRPASPID-LGDGLEMWTGLFQSAIFT 363
+ P +++Q +D+ ++ Y GR +F P LG G E+W G QS
Sbjct: 148 GQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPA 207
Query: 364 S-KAFINVDVAHKGFPKNQPMIDAFTRDFRLDPNRPMDRQTRPV 492
K +N+DV+ F K QP+I+ + R +D Q +P+
Sbjct: 208 MWKMMLNIDVSATAFYKAQPVIEFMCEVLDI---RNIDEQPKPL 248
>BC063275-1|AAH63275.1| 857|Homo sapiens eukaryotic translation
initiation factor 2C, 1 protein.
Length = 857
Score = 73.3 bits (172), Expect = 5e-13
Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D KN Y++T LP I ER +V I GKD F+VS K IV + + H A
Sbjct: 92 YDGKKNIYTVTALP-IGNERVDFEVTIPG-EGKDRIFKVSIKWLAIVSWR--MLHEALVS 147
Query: 187 SSLNAPTDTIQCIDIVLKQGTLESYVKAGRQYFMRPASPID-LGDGLEMWTGLFQSAIFT 363
+ P +++Q +D+ ++ Y GR +F P LG G E+W G QS
Sbjct: 148 GQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPA 207
Query: 364 S-KAFINVDVAHKGFPKNQPMID 429
K +N+DV+ F K QP+I+
Sbjct: 208 MWKMMLNIDVSATAFYKAQPVIE 230
>BC125213-1|AAI25214.1| 808|Homo sapiens EIF2C2 protein protein.
Length = 808
Score = 69.3 bits (162), Expect = 8e-12
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
FD KN Y+ PLP I ++ ++V + GKD F+VS K V + H A G
Sbjct: 43 FDGRKNLYTAMPLP-IGRDKVELEVTLPG-EGKDRIFKVSIKWVSCVSLQAL--HDALSG 98
Query: 187 SSLNAPTDTIQCIDIVLKQGTLESYVKAGRQYFMRPASPID-LGDGLEMWTGLFQSAIFT 363
+ P +TIQ +D+V++ Y GR +F + LG G E+W G QS +
Sbjct: 99 RLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPS 158
Query: 364 S-KAFINVDVAHKGFPKNQPMID 429
K +N+DV+ F K QP+I+
Sbjct: 159 LWKMMLNIDVSATAFYKAQPVIE 181
>AY077717-1|AAL76093.1| 851|Homo sapiens eukaryotic initiation
factor 2C2 protein.
Length = 851
Score = 69.3 bits (162), Expect = 8e-12
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
FD KN Y+ PLP I ++ ++V + GKD F+VS K V + H A G
Sbjct: 86 FDGRKNLYTAMPLP-IGRDKVELEVTLPG-EGKDRIFKVSIKWVSCVSLQAL--HDALSG 141
Query: 187 SSLNAPTDTIQCIDIVLKQGTLESYVKAGRQYFMRPASPID-LGDGLEMWTGLFQSAIFT 363
+ P +TIQ +D+V++ Y GR +F + LG G E+W G QS +
Sbjct: 142 RLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPS 201
Query: 364 S-KAFINVDVAHKGFPKNQPMID 429
K +N+DV+ F K QP+I+
Sbjct: 202 LWKMMLNIDVSATAFYKAQPVIE 224
>AL139286-2|CAI22802.1| 860|Homo sapiens eukaryotic translation
initiation factor 2C, 3 protein.
Length = 860
Score = 67.7 bits (158), Expect = 2e-11
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D ++ Y+ PLP TT + V + GKD PF+VS K V + ++L + TG
Sbjct: 86 YDGKRSLYTANPLPVATTG-VDLDVTLPGEGGKDRPFKVSIKFVSRVSW-HLLHEVLTGR 143
Query: 187 S-----SLNAP--TDTIQCIDIVLKQGTLESYVKAGRQYFMRPAS-PIDLGDGLEMWTGL 342
+ L+ P T+ + +D+VL+ Y GR +F P LG G E+W G
Sbjct: 144 TLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGF 203
Query: 343 FQSAIFTS-KAFINVDVAHKGFPKNQPMIDAFTRDFRLDPNRPMDRQTRPV 492
QS K +N+DV+ F K QP+I LD + +D Q RP+
Sbjct: 204 HQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCE--VLDIHN-IDEQPRPL 251
>AL138787-5|CAI22268.1| 860|Homo sapiens eukaryotic translation
initiation factor 2C, 3 protein.
Length = 860
Score = 67.7 bits (158), Expect = 2e-11
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D ++ Y+ PLP TT + V + GKD PF+VS K V + ++L + TG
Sbjct: 86 YDGKRSLYTANPLPVATTG-VDLDVTLPGEGGKDRPFKVSIKFVSRVSW-HLLHEVLTGR 143
Query: 187 S-----SLNAP--TDTIQCIDIVLKQGTLESYVKAGRQYFMRPAS-PIDLGDGLEMWTGL 342
+ L+ P T+ + +D+VL+ Y GR +F P LG G E+W G
Sbjct: 144 TLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGF 203
Query: 343 FQSAIFTS-KAFINVDVAHKGFPKNQPMIDAFTRDFRLDPNRPMDRQTRPV 492
QS K +N+DV+ F K QP+I LD + +D Q RP+
Sbjct: 204 HQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCE--VLDIHN-IDEQPRPL 251
>AK022827-1|BAB14262.1| 860|Homo sapiens protein ( Homo sapiens
cDNA FLJ12765 fis, clone NT2RP2001511, moderately
similar to Homo sapiens putative RNA-binding protein Q99
mRNA. ).
Length = 860
Score = 67.7 bits (158), Expect = 2e-11
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D ++ Y+ PLP TT + V + GKD PF+VS K V + ++L + TG
Sbjct: 86 YDGKRSLYTANPLPVATTG-VDLDVTLPGEGGKDRPFKVSIKFVSRVSW-HLLHEVLTGR 143
Query: 187 S-----SLNAP--TDTIQCIDIVLKQGTLESYVKAGRQYFMRPAS-PIDLGDGLEMWTGL 342
+ L+ P T+ + +D+VL+ Y GR +F P LG G E+W G
Sbjct: 144 TLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGF 203
Query: 343 FQSAIFTS-KAFINVDVAHKGFPKNQPMIDAFTRDFRLDPNRPMDRQTRPV 492
QS K +N+DV+ F K QP+I LD + +D Q RP+
Sbjct: 204 HQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCE--VLDIHN-IDEQPRPL 251
>AL359186-1|CAH71584.1| 861|Homo sapiens eukaryotic translation
initiation factor 2C, 4 protein.
Length = 861
Score = 66.1 bits (154), Expect = 7e-11
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D +N Y+ PLP I +R ++V + GKD F+VS + +V +L+ +A G
Sbjct: 84 YDGKRNMYTAHPLP-IGRDRVDMEVTLPG-EGKDQTFKVSVQWVSVVSLQLLLEALA--G 139
Query: 187 SSLNAPTDTIQCIDIVLKQGTLESYVKAGRQYFMRPASPI-DLGDGLEMWTGLFQSAIFT 363
P D++Q +D++ + Y GR +F P LG G E+W G QS
Sbjct: 140 HLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPA 199
Query: 364 S-KAFINVDVAHKGFPKNQPMID 429
+N+DV+ F + QP+I+
Sbjct: 200 MWNMMLNIDVSATAFYRAQPIIE 222
>AL354864-1|CAH73806.1| 861|Homo sapiens eukaryotic translation
initiation factor 2C, 4 protein.
Length = 861
Score = 66.1 bits (154), Expect = 7e-11
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D +N Y+ PLP I +R ++V + GKD F+VS + +V +L+ +A G
Sbjct: 84 YDGKRNMYTAHPLP-IGRDRVDMEVTLPG-EGKDQTFKVSVQWVSVVSLQLLLEALA--G 139
Query: 187 SSLNAPTDTIQCIDIVLKQGTLESYVKAGRQYFMRPASPI-DLGDGLEMWTGLFQSAIFT 363
P D++Q +D++ + Y GR +F P LG G E+W G QS
Sbjct: 140 HLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPA 199
Query: 364 S-KAFINVDVAHKGFPKNQPMID 429
+N+DV+ F + QP+I+
Sbjct: 200 MWNMMLNIDVSATAFYRAQPIIE 222
>AB046787-1|BAB13393.1| 924|Homo sapiens KIAA1567 protein protein.
Length = 924
Score = 66.1 bits (154), Expect = 7e-11
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D +N Y+ PLP I +R ++V + GKD F+VS + +V +L+ +A G
Sbjct: 147 YDGKRNMYTAHPLP-IGRDRVDMEVTLPG-EGKDQTFKVSVQWVSVVSLQLLLEALA--G 202
Query: 187 SSLNAPTDTIQCIDIVLKQGTLESYVKAGRQYFMRPASPI-DLGDGLEMWTGLFQSAIFT 363
P D++Q +D++ + Y GR +F P LG G E+W G QS
Sbjct: 203 HLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPA 262
Query: 364 S-KAFINVDVAHKGFPKNQPMID 429
+N+DV+ F + QP+I+
Sbjct: 263 MWNMMLNIDVSATAFYRAQPIIE 285
>AL139286-1|CAI22801.1| 229|Homo sapiens eukaryotic translation
initiation factor 2C, 3 protein.
Length = 229
Score = 56.8 bits (131), Expect = 4e-08
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D ++ Y+ PLP TT + V + GKD PF+VS K V + ++L + TG
Sbjct: 86 YDGKRSLYTANPLPVATTG-VDLDVTLPGEGGKDRPFKVSIKFVSRVSW-HLLHEVLTGR 143
Query: 187 S-----SLNAP--TDTIQCIDIVLKQGTLESYVKAGRQYFMRPAS-PIDLGDGLEMWTGL 342
+ L+ P T+ + +D+VL+ Y GR +F P LG G E+W G
Sbjct: 144 TLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGF 203
Query: 343 FQSAIFTS-KAFINVD 387
QS K +N+D
Sbjct: 204 HQSVRPAMWKMMLNID 219
>AK027796-1|BAB55374.1| 229|Homo sapiens protein ( Homo sapiens
cDNA FLJ14890 fis, clone PLACE1004149, weakly similar to
Rattus norvegicus GERp95 mRNA. ).
Length = 229
Score = 55.2 bits (127), Expect = 1e-07
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
+D ++ Y+ PLP TT + V + GKD PF+VS K V + ++L + TG
Sbjct: 86 YDGKRSLYTANPLPVATTG-VDLDVTLPGEGGKDRPFKVSIKFVSRVSW-HLLHEVLTGR 143
Query: 187 S-----SLNAP--TDTIQCIDIVLKQGTLESYVKAGRQYFMRPAS-PIDLGDGLEMWTGL 342
+ L+ P T+ +D+VL+ Y GR +F P LG G E+W G
Sbjct: 144 TLPEPLELDKPISTNPAHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGF 203
Query: 343 FQSAIFTS-KAFINVD 387
QS K +N+D
Sbjct: 204 HQSVRPAMWKMMLNID 219
>BC066888-1|AAH66888.1| 229|Homo sapiens EIF2C3 protein protein.
Length = 229
Score = 54.8 bits (126), Expect = 2e-07
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Frame = +1
Query: 7 FDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGG 186
++ ++ Y+ PLP TT + V + GKD PF+VS K V + ++L + TG
Sbjct: 86 YNGKRSLYTANPLPVATTG-VDLDVTLPGEGGKDRPFKVSIKFVSRVSW-HLLHEVLTGR 143
Query: 187 S-----SLNAP--TDTIQCIDIVLKQGTLESYVKAGRQYFMRPAS-PIDLGDGLEMWTGL 342
+ L+ P T+ + +D+VL+ Y GR +F P LG G E+W G
Sbjct: 144 TLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGF 203
Query: 343 FQSAIFTS-KAFINVD 387
QS K +N+D
Sbjct: 204 HQSVRPAMWKMMLNID 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,363,921
Number of Sequences: 237096
Number of extensions: 1902604
Number of successful extensions: 3114
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3104
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -