Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302H05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 33 0.12
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 33 0.12
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 27 6.2
U13070-13|AAC46637.2| 248|Caenorhabditis elegans Hypothetical p... 27 6.2
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 27 6.2
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 304 IDLGDGLEMWTGLFQSAIFTS--KAFINVDVAHKGFPKNQPMIDAFTRD 444
+DL G EMWTG F SA S + +N+DVAH F K + + F D
Sbjct: 267 LDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAFYKTRITVLQFMCD 315
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 304 IDLGDGLEMWTGLFQSAIFTS--KAFINVDVAHKGFPKNQPMIDAFTRD 444
+DL G EMWTG F SA S + +N+DVAH F K + + F D
Sbjct: 264 LDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAFYKTRITVLQFMCD 312
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 304 IDLGDGLEMWTGLFQSAIFTS--KAFINVDVAHKGFPKNQPMIDAFTRD 444
+DL G EMWTG F SA S + +N+DVAH F K + + F D
Sbjct: 267 LDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAFYKTRITVLQFMCD 315
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 304 IDLGDGLEMWTGLFQSAIFTS--KAFINVDVAHKGFPKNQPMIDAFTRD 444
+DL G EMWTG F SA S + +N+DVAH F K + + F D
Sbjct: 264 LDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAFYKTRITVLQFMCD 312
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 304 IDLGDGLEMWTGLFQSAIFTS--KAFINVDVAHKGFPKNQPMIDAFTRD 444
+DL G EMWTG F SA S + +N+DVAH F K + + F D
Sbjct: 266 LDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAFYKTRITVLQFMCD 314
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 304 IDLGDGLEMWTGLFQSAIFTS--KAFINVDVAHKGFPKNQPMIDAFTRD 444
+DL G EMWTG F SA S + +N+DVAH F K + + F D
Sbjct: 269 LDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAFYKTRITVLQFMCD 317
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 304 IDLGDGLEMWTGLFQSAIFTS--KAFINVDVAHKGFPKNQPMIDAFTRD 444
+DL G EMWTG F SA S + +N+DVAH F K + + F D
Sbjct: 266 LDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAFYKTRITVLQFMCD 314
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 304 IDLGDGLEMWTGLFQSAIFTS--KAFINVDVAHKGFPKNQPMIDAFTRD 444
+DL G EMWTG F SA S + +N+DVAH F K + + F D
Sbjct: 269 LDLEGGKEMWTGFFSSAHIASNYRPLLNIDVAHTAFYKTRITVLQFMCD 317
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 33.1 bits (72), Expect = 0.12
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = +1
Query: 103 KDMPFEVSFKASGIVDYNNVLKHMATGGSSLNAPTDTIQCIDIVLKQGTLESYVKAGRQY 282
+ +PFE I+ + LK+ G S + P + V G
Sbjct: 265 RQVPFEAVQAMDVILRHLPSLKYTPVGRSFFSPPVPNASGVMAGSCPPQASGAVAGGAHS 324
Query: 283 FMRPASPIDLGDGLEMWTGLFQSAIFTS-KAFINVDVAHKGFPKNQPMID 429
+ + LG G E+W G QS + K +N+DV+ F ++ P+I+
Sbjct: 325 AGQYHAESKLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRSMPVIE 374
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 33.1 bits (72), Expect = 0.12
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = +1
Query: 103 KDMPFEVSFKASGIVDYNNVLKHMATGGSSLNAPTDTIQCIDIVLKQGTLESYVKAGRQY 282
+ +PFE I+ + LK+ G S + P + V G
Sbjct: 265 RQVPFEAVQAMDVILRHLPSLKYTPVGRSFFSPPVPNASGVMAGSCPPQASGAVAGGAHS 324
Query: 283 FMRPASPIDLGDGLEMWTGLFQSAIFTS-KAFINVDVAHKGFPKNQPMID 429
+ + LG G E+W G QS + K +N+DV+ F ++ P+I+
Sbjct: 325 AGQYHAESKLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRSMPVIE 374
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 33.1 bits (72), Expect = 0.12
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = +1
Query: 103 KDMPFEVSFKASGIVDYNNVLKHMATGGSSLNAPTDTIQCIDIVLKQGTLESYVKAGRQY 282
+ +PFE I+ + LK+ G S + P + V G
Sbjct: 273 RQVPFEAVQAMDVILRHLPSLKYTPVGRSFFSPPVPNASGVMAGSCPPQASGAVAGGAHS 332
Query: 283 FMRPASPIDLGDGLEMWTGLFQSAIFTS-KAFINVDVAHKGFPKNQPMID 429
+ + LG G E+W G QS + K +N+DV+ F ++ P+I+
Sbjct: 333 AGQYHAESKLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRSMPVIE 382
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 293 LHLRLTWATGSRCGLVYSNLLYLHRKPSSTLMLHTK-VSQRI 415
LHL T R Y+NL+ LH K TL+L K S RI
Sbjct: 56 LHLLSTIRVDRRHSFCYANLVQLHVKSHDTLLLTFKQASNRI 97
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 453 QTKITRESINHRLILWETFVCNINVDEGFR 364
+ ++TR IN L+ W+ + N+ DE FR
Sbjct: 1192 EEEVTRRRINRELLQWDLPLGNVEDDELFR 1221
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 453 QTKITRESINHRLILWETFVCNINVDEGFR 364
+ ++TR IN L+ W+ + N+ DE FR
Sbjct: 1192 EEEVTRRRINRELLQWDLPLGNVEDDELFR 1221
>U13070-13|AAC46637.2| 248|Caenorhabditis elegans Hypothetical
protein F01F1.3 protein.
Length = 248
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 296 HLRLTWATGSRCGLVYSN-LLYLHRKPSSTLMLHTKV 403
H+RL W + R G V +N L+++H+ + L + V
Sbjct: 42 HMRLRWLSDGRFGPVAANILMHIHKSDPKDISLSSNV 78
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 283 FMRPASPIDLGDGLEMWTGLFQSAIFTSKAFINVDVAHKGFPKNQPMIDAFTRDFRLDPN 462
F RP P + LE +F +A SK + V+ + P+ID + DFR+D N
Sbjct: 528 FTRPTKPFN---PLEQLMSVFPAA---SKQHLPVEWQKLMIQDDSPIIDLYPADFRIDLN 581
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,396,259
Number of Sequences: 27780
Number of extensions: 299919
Number of successful extensions: 709
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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