Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H04f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q73MS7 Cluster: Beta-1,4-galactosyltransferase, putativ...    36   0.56 
UniRef50_Q9AW87 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  

>UniRef50_Q73MS7 Cluster: Beta-1,4-galactosyltransferase, putative;
           n=1; Treponema denticola|Rep:
           Beta-1,4-galactosyltransferase, putative - Treponema
           denticola
          Length = 333

 Score = 35.9 bits (79), Expect = 0.56
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
 Frame = -1

Query: 398 ETHTKGKIET*IYKK*IHNQIISCFNCKLIQNKYVTV-----LYNNAFVAHM*NTYHGEK 234
           E  T   +   +  K IHN +  C+N +L++  Y T+     +Y   +   +   Y   K
Sbjct: 139 EDETHKTLADVLQNKAIHNLVNKCYNAQLLKRIYDTISNSYAVYAEDYYQSVIIEYFSNK 198

Query: 233 IK*VN-RLSKYFRY*GNLSNITFS 165
            K ++  L  YFRY G  SN TFS
Sbjct: 199 KKFIDIPLYNYFRYIGITSNNTFS 222


>UniRef50_Q9AW87 Cluster: Putative uncharacterized protein; n=1;
           Guillardia theta|Rep: Putative uncharacterized protein -
           Guillardia theta (Cryptomonas phi)
          Length = 626

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +3

Query: 207 FRQSIYSFNLFSVICILHMSYKCVII*NGNIFVLNQFTIETRNDLIVDLFFINSGFYFSF 386
           F   I +F LF+ ICI  ++Y C I     +F  ++FT    N + ++ F +N   +F F
Sbjct: 110 FTYFIKAFYLFNPICIYKINYFCHIFITIELF-FSKFTKYFYNKIKINCFILNLITFFDF 168


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,152,595
Number of Sequences: 1657284
Number of extensions: 7366299
Number of successful extensions: 12087
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12085
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)