Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302H02f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 201 3e-52
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 2e-51
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 197 4e-51
SB_56| Best HMM Match : Actin (HMM E-Value=0) 197 4e-51
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 197 5e-51
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 2e-50
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 177 5e-45
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 72 3e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 6e-10
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 37 0.009
SB_54| Best HMM Match : Actin (HMM E-Value=0) 33 0.19
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 3.1
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.1
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 28 4.1
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 7.1
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4) 27 9.4
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) 27 9.4
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 201 bits (490), Expect = 3e-52
Identities = 92/99 (92%), Positives = 96/99 (96%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERK
Sbjct: 251 TTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERK 310
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 311 YSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 198 bits (484), Expect = 2e-51
Identities = 91/99 (91%), Positives = 95/99 (95%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERK
Sbjct: 240 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERK 299
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 300 YSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 197 bits (481), Expect = 4e-51
Identities = 90/99 (90%), Positives = 95/99 (95%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERK
Sbjct: 278 TTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERK 337
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 197 bits (481), Expect = 4e-51
Identities = 90/99 (90%), Positives = 95/99 (95%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERK
Sbjct: 277 TTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERK 336
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 337 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 197 bits (480), Expect = 5e-51
Identities = 90/99 (90%), Positives = 95/99 (95%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERK
Sbjct: 278 TTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERK 337
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 195 bits (476), Expect = 2e-50
Identities = 89/99 (89%), Positives = 95/99 (95%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERK
Sbjct: 277 TTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERK 336
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 337 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 177 bits (431), Expect = 5e-45
Identities = 79/98 (80%), Positives = 90/98 (91%)
Frame = -1
Query: 518 VYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKY 339
+YN IMKCDVDIRKDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKY
Sbjct: 52 IYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKY 111
Query: 338 SVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
SVWIGGSILASLSTFQQMWI+KEEY E GP IVHRKCF
Sbjct: 112 SVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 72.1 bits (169), Expect = 3e-13
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 16/114 (14%)
Frame = -1
Query: 518 VYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA----------------LA 387
V N I C +D+R+ LY N V+SGG+TM+ R+Q++I +
Sbjct: 227 VDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIK 286
Query: 386 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
P I+ ++I+ ++Y+VW GGS+LAS F + +K +YDE GP I F
Sbjct: 287 PKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 60.9 bits (141), Expect = 6e-10
Identities = 25/67 (37%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Frame = -1
Query: 494 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII---APPERKYSVWIG 324
D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++K+I + E++++ WIG
Sbjct: 164 DIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIG 223
Query: 323 GSILASL 303
GSILASL
Sbjct: 224 GSILASL 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 53.2 bits (122), Expect = 1e-07
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 29/118 (24%)
Frame = -1
Query: 518 VYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL----------------- 390
++N I D+D R + Y + V+SGG+TMYPG+ R+++EI L
Sbjct: 282 LFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGM 341
Query: 389 ----APSTI-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 252
P T K KI I P RK+ V++GG++LA + W++++EY+E G
Sbjct: 342 GMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = -1
Query: 506 IMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST-------IK-IKIIAPP 351
++ C +D RK L N V+ GGT M PG R+ +EI L S IK +K+ PP
Sbjct: 66 LLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPP 125
Query: 350 -ERKYSVWIGGSILASLSTFQQMWISKEEYDE 258
+ W+GG+I SL ++E Y +
Sbjct: 126 VNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 37.1 bits (82), Expect = 0.009
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -1
Query: 506 IMKCDVDIRKDLYANTVMSGGTTMYPG 426
I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 265 IQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 32.7 bits (71), Expect = 0.19
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSG 447
+++ I KCD+D+R +L+ N V+SG
Sbjct: 2322 SIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 426 YRRQDAEGDHRPRALDHQDQDHRSPREE 343
+RRQDA DHR + DH QD PR++
Sbjct: 664 HRRQDA--DHRRQDADHHRQDVVHPRQD 689
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 316 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 453
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 464 NTVMSGGTTMYPGIADRMQKEITALAP 384
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -3
Query: 507 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 334
HHE R P H H P ++ E P DH++++ P +
Sbjct: 321 HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAHPPEQHHEE 380
Query: 333 MDRWIHP 313
+R +HP
Sbjct: 381 EERGVHP 387
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 467 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 348
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -3
Query: 507 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 334
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 333 MDRWIHP 313
+R +HP
Sbjct: 214 EERGVHP 220
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -3
Query: 504 HEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 406
H R+H P R HR+ R + +P RY R+DA+
Sbjct: 307 HRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 467 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 348
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
>SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4)
Length = 126
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 423 RRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFP 304
RRQ HR R D +D+D R L DR+ + +P
Sbjct: 4 RRQGTATIHRYRQSDLRDRDRRRVLPRFLEQDRFDNSDYP 43
>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
Length = 352
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 129 SGITRYNVLTVAFRTRTSTTPHSTGVT 209
+GIT N++T A T TSTT + VT
Sbjct: 294 NGITNTNIITTATTTTTSTTISTITVT 320
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,416,673
Number of Sequences: 59808
Number of extensions: 291993
Number of successful extensions: 995
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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