Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302H02f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 190 6e-49
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 190 6e-49
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 190 6e-49
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 190 6e-49
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 189 1e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 189 1e-48
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 2e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 2e-47
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 173 5e-44
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 162 1e-40
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 145 2e-35
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 142 1e-34
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 108 2e-24
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 80 1e-15
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 72 3e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 69 1e-12
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 59 2e-09
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 48 4e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 42 2e-04
At5g43500.2 68418.m05318 expressed protein 40 0.001
At5g43500.1 68418.m05319 expressed protein 40 0.001
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 30 1.1
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 5.8
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 7.7
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 7.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 190 bits (462), Expect = 6e-49
Identities = 85/99 (85%), Positives = 92/99 (92%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERK
Sbjct: 279 TTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERK 338
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 339 YSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 190 bits (462), Expect = 6e-49
Identities = 85/99 (85%), Positives = 92/99 (92%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERK
Sbjct: 279 TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERK 338
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 339 YSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 190 bits (462), Expect = 6e-49
Identities = 85/99 (85%), Positives = 92/99 (92%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERK
Sbjct: 279 TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERK 338
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 339 YSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 190 bits (462), Expect = 6e-49
Identities = 85/99 (85%), Positives = 92/99 (92%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERK
Sbjct: 279 TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERK 338
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 339 YSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 189 bits (460), Expect = 1e-48
Identities = 85/99 (85%), Positives = 92/99 (92%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERK
Sbjct: 279 TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERK 338
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 339 YSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 189 bits (460), Expect = 1e-48
Identities = 85/99 (85%), Positives = 92/99 (92%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERK
Sbjct: 279 TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERK 338
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 339 YSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 2e-47
Identities = 83/99 (83%), Positives = 90/99 (90%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERK
Sbjct: 279 TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERK 338
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 339 YSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 2e-47
Identities = 83/99 (83%), Positives = 90/99 (90%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERK
Sbjct: 279 TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERK 338
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 339 YSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 173 bits (422), Expect = 5e-44
Identities = 77/99 (77%), Positives = 86/99 (86%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERK
Sbjct: 280 TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERK 339
Query: 341 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
YSVW+GGSILASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 340 YSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 162 bits (393), Expect = 1e-40
Identities = 72/97 (74%), Positives = 84/97 (86%)
Frame = -1
Query: 515 YNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYS 336
YN IMKCD DIRKDLY N V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYS
Sbjct: 233 YNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYS 292
Query: 335 VWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
VWIGGSILASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 293 VWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 145 bits (351), Expect = 2e-35
Identities = 67/83 (80%), Positives = 75/83 (90%)
Frame = -1
Query: 521 TVYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK 342
T YN IMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERK
Sbjct: 279 TTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERK 338
Query: 341 YSVWIGGSILASLSTFQQMWISK 273
YSVWIGGSILASLSTFQQ+ I +
Sbjct: 339 YSVWIGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 142 bits (344), Expect = 1e-34
Identities = 61/95 (64%), Positives = 77/95 (81%)
Frame = -1
Query: 512 NFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 333
N I+KC VD R+D+Y N +M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SV
Sbjct: 271 NSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSV 330
Query: 332 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 228
WIGGSILASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 331 WIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 108 bits (260), Expect = 2e-24
Identities = 47/100 (47%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
Frame = -1
Query: 518 VYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PE 348
V I KCDVDIR++LY++ +++GGT+ + +R++K++ +P + ++K++A E
Sbjct: 341 VMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTE 400
Query: 347 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 228
R++SVWIGGSILASL +FQQMW SK EY+E G + RKC
Sbjct: 401 RRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 79.8 bits (188), Expect = 1e-15
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = -1
Query: 479 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK------YSVWIGGS 318
+ L NTV+ GGTT G R QKE L S I+ ++ PPE YS W+GG+
Sbjct: 274 RQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGA 332
Query: 317 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
ILA + Q ++K +YDE+GP +VHRKCF
Sbjct: 333 ILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 71.7 bits (168), Expect = 3e-13
Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 12/101 (11%)
Frame = -1
Query: 518 VYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI------TALAPS-----TIK 372
V+ I + D+D R LY + V+SGG+TMYPG+ R++KEI T L + ++
Sbjct: 279 VFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLR 338
Query: 371 IKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 252
++I PP RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 339 LRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 69.3 bits (162), Expect = 1e-12
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = -1
Query: 506 IMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWI 327
I C ++ LY + +++GG+T++P + +R++ E+ L P +KI + VW
Sbjct: 327 INSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWR 386
Query: 326 GGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 225
GGS+LAS F+ M ++K EY+E G R+ F
Sbjct: 387 GGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Frame = -1
Query: 506 IMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTI---------------- 375
I +D R+ LY N V+SGG+TM+ R+Q+++ + + +
Sbjct: 313 IQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPV 372
Query: 374 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 243
++ +++ P ++++VW GGS+L+S F +KEEY+E G I
Sbjct: 373 EVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/72 (29%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = -1
Query: 470 YANTVMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLST 297
+ V++GG+ PG+++R+++E+ PS+I I++I PP + W G ++++LS
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSI 451
Query: 296 FQQMW-ISKEEY 264
F W I+++++
Sbjct: 452 FPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = -1
Query: 488 DIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 309
++ + L ++ +M+GG ++ PG+ +R++ I + P I ++ + W G S A
Sbjct: 632 ELEERLTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFA 691
Query: 308 SLSTFQQMWISKEEYDESG 252
+ F +K +YDE G
Sbjct: 692 ANLNFLGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = -1
Query: 491 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIG 324
+D+R+ L+++ + GG + G+ +++ + P T I + + E ++ W G
Sbjct: 476 IDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKG 535
Query: 323 GSILASLSTFQQMWISKEEYDESG 252
G+IL L ++ WI + ++ +G
Sbjct: 536 GAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = -1
Query: 491 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIG 324
+D+R+ L+++ + GG + G+ +++ + P T I + + E ++ W G
Sbjct: 488 IDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKG 547
Query: 323 GSILASLSTFQQMWISKEEYDESG 252
G+IL L ++ WI + ++ +G
Sbjct: 548 GAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = -1
Query: 518 VYNFIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKY 339
+Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP+RK+
Sbjct: 340 IYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKH 396
Query: 338 S 336
+
Sbjct: 397 A 397
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 414 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 301
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 458 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 360
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 458 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 360
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,825,867
Number of Sequences: 28952
Number of extensions: 189691
Number of successful extensions: 589
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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