Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302H01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   2.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   2.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   2.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.7  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = -2

Query: 142 SQHYVVFFGRNNSHRNKIKPFGILYDLLHFFNGTFIPVGTNL 17
           S+ Y  F     S+  ++ PFG+   +  F     + +GT +
Sbjct: 409 SRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEV 450


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 359 YILLKTNSLKC*VWLHLVKVL 297
           YILL  NS  C   + LVK+L
Sbjct: 444 YILLAMNSAVCHQTIELVKML 464


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 359 YILLKTNSLKC*VWLHLVKVL 297
           YILL  NS  C   + LVK+L
Sbjct: 169 YILLAMNSAVCHQTIELVKML 189


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 251 LSVLYSNRRRHRACLLKPLPNVTIPNISTNLSLE 352
           L V  SNR +  A    P+  ++IP +   L LE
Sbjct: 42  LGVSLSNRFKQDAEETVPVKKISIPPLGEILELE 75


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 255 RFYTQTVDDIVRAC*NL 305
           ++Y+QT+D+  + C NL
Sbjct: 196 QWYSQTIDNSYQFCDNL 212


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/40 (20%), Positives = 18/40 (45%)
 Frame = +2

Query: 107 VISTKENDVVLGNLYFEASGCSSLVNIVDELEGWPVFLEK 226
           ++++  N    G+  F A+     +   +  + WP  +EK
Sbjct: 252 ILNSGYNLTTFGSFIFNANSAIEGIIFFNLAKSWPQLIEK 291


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 255 RFYTQTVDDIVRAC*NL 305
           ++Y+QT+D+  + C NL
Sbjct: 187 QWYSQTIDNSYQFCDNL 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,033
Number of Sequences: 336
Number of extensions: 2814
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)