Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G12f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69302-9|CAA93265.2|  146|Caenorhabditis elegans Hypothetical pr...    49   2e-06
AF036696-3|ABB51190.1|  292|Caenorhabditis elegans Hypothetical ...    35   0.041
AF036696-2|AAB88349.1|  324|Caenorhabditis elegans Hypothetical ...    35   0.041
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    29   2.7  
U70848-4|AAB09108.1|  869|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z69302-9|CAA93265.2|  146|Caenorhabditis elegans Hypothetical
           protein F40F8.3 protein.
          Length = 146

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +1

Query: 235 DSYA-ISGVILIIMVLVNTWSSRHYLRSLDAAPNSVAPTVISAASSYVLSGFIGIVLFEE 411
           + YA  S V + I   +  W++  Y R+L  +  +  P +I+ A ++ L+G +G ++F E
Sbjct: 58  EQYARCSCVAVFIGSNIVMWAT--YTRALALSDCTSTPMIINMACNFALTGILGSLIFSE 115

Query: 412 PSSTQWWAGAILIIMGLTLIARPKDRD 492
             S  WW   I++I GLT++   K  D
Sbjct: 116 SHSYLWWLLLIMLITGLTMLLSSKHED 142


>AF036696-3|ABB51190.1|  292|Caenorhabditis elegans Hypothetical
           protein F15B10.1b protein.
          Length = 292

 Score = 34.7 bits (76), Expect = 0.041
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 304 YLRSLDAAPNSVAPTVISAASSYVLSGFIGIVLFEEPSSTQWWAGAILIIMGLTLIA 474
           Y+  L++  +S+  T++     + LS  + IV F+ P + Q W GAIL+  G    A
Sbjct: 220 YVYQLNSRVDSLTVTLVVTLRKF-LSLIVSIVYFKNPFTPQHWLGAILVFAGTLAFA 275


>AF036696-2|AAB88349.1|  324|Caenorhabditis elegans Hypothetical
           protein F15B10.1a protein.
          Length = 324

 Score = 34.7 bits (76), Expect = 0.041
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 304 YLRSLDAAPNSVAPTVISAASSYVLSGFIGIVLFEEPSSTQWWAGAILIIMGLTLIA 474
           Y+  L++  +S+  T++     + LS  + IV F+ P + Q W GAIL+  G    A
Sbjct: 252 YVYQLNSRVDSLTVTLVVTLRKF-LSLIVSIVYFKNPFTPQHWLGAILVFAGTLAFA 307


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
 Frame = -1

Query: 440 APAHHWVLDGSSNNT----IPIKPDRT*LEAADMT--VGATELGAASS 315
           AP H  V DGSS+ T     P++PD +     DMT     T+L  +SS
Sbjct: 525 APDHSTVHDGSSSTTKGLIYPLEPDESSSGTMDMTTPTSTTDLATSSS 572


>U70848-4|AAB09108.1|  869|Caenorhabditis elegans Hypothetical
           protein C43G2.2 protein.
          Length = 869

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = +1

Query: 295 SRHYLRSLDAAPNSVAPTVISAASSYVLSGFIGIVLFEEPSSTQWWAGAILIIMGLTLIA 474
           ++ YL + +++  S      S AS+++  G  G       S+  WW+G  +  M      
Sbjct: 718 TKKYLPATESSSLSGFNNNSSTASTFIFGGLEGRATQGRQSAISWWSGDDVTTMRRRRTP 777

Query: 475 RPKD 486
            P+D
Sbjct: 778 TPED 781


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,084,668
Number of Sequences: 27780
Number of extensions: 211448
Number of successful extensions: 400
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)