Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G10f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5I0E6 Cluster: Propanediol utilization protein; n=4; C...    35   1.3  
UniRef50_Q65UU3 Cluster: Putative uncharacterized protein; n=2; ...    33   4.0  
UniRef50_O25547 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q7P5T9 Cluster: Putative uncharacterized protein FNV086...    33   4.0  
UniRef50_Q180D4 Cluster: Putative uncharacterized protein; n=2; ...    33   4.0  
UniRef50_Q4XGJ6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_A6PNL2 Cluster: Peptidase U32; n=1; Victivallis vadensi...    32   6.9  
UniRef50_Q6MHY5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_A0UXY5 Cluster: Outer membrane protein-like precursor; ...    32   9.2  
UniRef50_Q86HK6 Cluster: Similar to Oryza sativa (Japonica culti...    32   9.2  

>UniRef50_A5I0E6 Cluster: Propanediol utilization protein; n=4;
           Clostridium botulinum|Rep: Propanediol utilization
           protein - Clostridium botulinum A str. ATCC 3502
          Length = 279

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = +1

Query: 112 KEDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMV-DSFN--EFYKN 261
           KE NSI  L    K++IE+   K  S ++ E++K+NF  +  D FN  E YKN
Sbjct: 174 KEMNSIEDLIPDLKESIEKRNIKNISRISEESIKRNFHRLTYDYFNTVEKYKN 226


>UniRef50_Q65UU3 Cluster: Putative uncharacterized protein; n=2;
           Pasteurellaceae|Rep: Putative uncharacterized protein -
           Mannheimia succiniciproducens (strain MBEL55E)
          Length = 449

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = -3

Query: 345 LLHSIYLGLCT*ILKNYF--SGFRCFRGLQIFIKFVEAVYHRAKVFLNSL 202
           LL  I+LGLC   + N F  S F  F G+ +F+ F+E + +  + F+NSL
Sbjct: 10  LLIIIFLGLCIVTIDNIFIVSDFVLF-GIFLFLLFLEVIINPKRNFINSL 58


>UniRef50_O25547 Cluster: Putative uncharacterized protein; n=1;
           Helicobacter pylori|Rep: Putative uncharacterized
           protein - Helicobacter pylori (Campylobacter pylori)
          Length = 140

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +1

Query: 85  HAFVKRDAPKEDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNL 264
           H +  +D  K    +  L E   +  EEL    ES    +   + +   + +F ++YK++
Sbjct: 69  HTYTSKDLEKIQKDLEELEEGVPELFEELERDEESIAKNKKTIQEYQNKIANFQKYYKDI 128

Query: 265 K 267
           K
Sbjct: 129 K 129


>UniRef50_Q7P5T9 Cluster: Putative uncharacterized protein FNV0869;
           n=1; Fusobacterium nucleatum subsp. vincentii ATCC
           49256|Rep: Putative uncharacterized protein FNV0869 -
           Fusobacterium nucleatum subsp. vincentii ATCC 49256
          Length = 129

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = +1

Query: 91  FVKRDAPKEDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKP 270
           F+  + P   NS   +  + KKT ++    + S +  + +K +    + + N+F+K LK 
Sbjct: 3   FIAGNTPSSKNSKRIITITNKKTGKKTTRLINSEVTEKYIKNSKADWLINKNKFFKMLKD 62

Query: 271 AEAPKA*EVIF 303
            E P   E+ F
Sbjct: 63  KEKPYKVELYF 73


>UniRef50_Q180D4 Cluster: Putative uncharacterized protein; n=2;
           Clostridium difficile|Rep: Putative uncharacterized
           protein - Clostridium difficile (strain 630)
          Length = 349

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +1

Query: 79  NVHAFVKRDAPKED---NSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNE 249
           ++  ++KR+  K D   NS N LAE   K ++ L+E VE        K+N    ++ +NE
Sbjct: 241 SIAEYLKRERDKNDTKVNSENELAEEECKVLDTLKENVE--------KENIDACIEFWNE 292

Query: 250 FYKN 261
           + KN
Sbjct: 293 YKKN 296


>UniRef50_Q4XGJ6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 37

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 246 VEAVYHRAKVFLNSLRGQGGF-NFFPQFLNCFL 151
           +E  YH    FLN L G   F NFFP FL+C L
Sbjct: 1   MEIFYHFVFFFLNPLNGLYIFDNFFPHFLSCHL 33


>UniRef50_A6PNL2 Cluster: Peptidase U32; n=1; Victivallis vadensis
           ATCC BAA-548|Rep: Peptidase U32 - Victivallis vadensis
           ATCC BAA-548
          Length = 748

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 139 AESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKP 270
           A   K    E  E V+  L PE V  N  T ++ F  FY +LKP
Sbjct: 484 ASELKAVRREFWEYVKQNLKPEAVFHNSATGLEQFRRFYLSLKP 527


>UniRef50_Q6MHY5 Cluster: Putative uncharacterized protein; n=1;
           Bdellovibrio bacteriovorus|Rep: Putative uncharacterized
           protein - Bdellovibrio bacteriovorus
          Length = 267

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +1

Query: 142 ESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPKA*EVI 300
           E   K +EE+R K+ S +  + VK +    VD+  + Y N+KP +A K  E +
Sbjct: 169 EKRLKELEEMRSKI-SGILEDRVKAD-DEKVDTLVQMYTNMKPPQAAKVFETM 219


>UniRef50_A0UXY5 Cluster: Outer membrane protein-like precursor;
           n=1; Clostridium cellulolyticum H10|Rep: Outer membrane
           protein-like precursor - Clostridium cellulolyticum H10
          Length = 414

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 154 KTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNL 264
           KTI++LR K E + A + +  +   MVD  NE Y  L
Sbjct: 52  KTIKDLRRKYEGSYAVDVLNTDRYVMVDRLNELYAKL 88


>UniRef50_Q86HK6 Cluster: Similar to Oryza sativa (Japonica
           cultivar-group). P0446G04.23 protein; n=3; Dictyostelium
           discoideum|Rep: Similar to Oryza sativa (Japonica
           cultivar-group). P0446G04.23 protein - Dictyostelium
           discoideum (Slime mold)
          Length = 1144

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = -3

Query: 384 GTRENFYSITSRTLLHSIYLGLCT*ILK-NYF--SGFRCFRGLQIFIKFVEAVYHRAKVF 214
           GT ENF  + ++T +   +LG C+ I + N F  S F+C RG ++ I      YH +  F
Sbjct: 428 GTFENF-RVYNQTAVEISHLGKCSIIGRLNLFDKSSFKCKRGSELLINGTLVHYHNS--F 484

Query: 213 LNS 205
           +NS
Sbjct: 485 INS 487


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,712,661
Number of Sequences: 1657284
Number of extensions: 9358365
Number of successful extensions: 26501
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26493
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)