Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302G10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF022976-11|AAC69080.1| 196|Caenorhabditis elegans Serpentine r... 29 2.0
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z49966-5|CAA90245.1| 445|Caenorhabditis elegans Hypothetical pr... 28 4.7
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 28 4.7
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 28 4.7
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.1
U00052-7|AAK21422.2| 232|Caenorhabditis elegans Fatty acid/reti... 27 8.1
CU457737-1|CAM36322.1| 373|Caenorhabditis elegans Hypothetical ... 27 8.1
AF067211-16|AAC16988.3| 399|Caenorhabditis elegans Hypothetical... 27 8.1
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.29
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 109 PKEDNSINTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 276
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>AF022976-11|AAC69080.1| 196|Caenorhabditis elegans Serpentine
receptor, class w protein108 protein.
Length = 196
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 489 VYQIVDPSGFINFFFTIIDYTLNISRFTIKPRAEF-GTRENFYSITSRTLLHSI 331
+ I DP IN F +I+ +NI I R+ T N + + LLH++
Sbjct: 17 IESIADPLNSINLFLSIVSINVNILHAIILTRSSMKSTSTNVIIVLTILLLHAL 70
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 115 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 285
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 115 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 285
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z49966-5|CAA90245.1| 445|Caenorhabditis elegans Hypothetical
protein F35C11.5 protein.
Length = 445
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -3
Query: 390 EFGTRENFYSITSRTLLHSIYLGLCT*ILKNYFSGFRCFRGLQIFIKFVEA-VYHRAKVF 214
+ GTRE F+ T+ HSI+L K S F C + + FVE+ ++++ ++
Sbjct: 16 QLGTREIFFVKTTEDRFHSIFLSAYK-PNKFISSIFVCCNSF-LLLNFVESFLFYKKEIR 73
Query: 213 LNSLRGQGGFNFFPQFL 163
L L N P FL
Sbjct: 74 LFFLNNLSTKNHQPNFL 90
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 112 KEDNSINTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 237
K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 45 KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 112 KEDNSINTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 237
K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 45 KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -3
Query: 252 KFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTLSQRIYAIVFFRSI 103
KF++A+Y +A VF +L+ + QF + + +T + ++ IV I
Sbjct: 228 KFIQAMYIQAAVFFLNLQLPILYTVLSQFTDFYSQTANNLVFIIVSLHGI 277
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 142 ESAKKTIEELREKVESALAPETVK 213
E+ K+ IEE+REK++S A +T K
Sbjct: 478 ENRKEGIEEIREKIDSLSAEKTSK 501
>Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical
protein H01G02.2 protein.
Length = 323
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +1
Query: 109 PKEDNSIN--TLAESAKKTIE--ELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 276
P EDN N T+ ++ K E E R L + + NF + S +F+K LK +E
Sbjct: 224 PNEDNWPNWRTMPDANKLLFEPKEPRNNWTEILLCKEISNNFTEFLGSHLQFFKRLKASE 283
Query: 277 APK 285
K
Sbjct: 284 LLK 286
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 136 LAESAKKTIEELREKVESALAPE 204
L E A K +EE ++K++SA APE
Sbjct: 436 LEEHAVKKLEEEKDKLQSAAAPE 458
>U00052-7|AAK21422.2| 232|Caenorhabditis elegans Fatty acid/retinol
binding proteinprotein 8 protein.
Length = 232
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 121 NSINTLAESAKKTIEELRE--KVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPKA*E 294
N+ + AK +++ E K+E A PE VK ++++ NLKP + K E
Sbjct: 156 NNAKSAVSGAKALLQDDSEAAKIEEAF-PEAVKLLNSKKFEAYSIIVNNLKPLDCVKDRE 214
Query: 295 VIF 303
+F
Sbjct: 215 QVF 217
>CU457737-1|CAM36322.1| 373|Caenorhabditis elegans Hypothetical
protein C52D10.1 protein.
Length = 373
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +3
Query: 222 WHDGRQLQRIL*KSEARGSTESLRSN----FLVSKYITPNISNVIMFSTLLNKSFPSCRI 389
WH+G R E ST++L S F + + +T +SN + L++KS SC
Sbjct: 133 WHNGGVRSRS--SEENSVSTQALESTVSTCFSIPRAVTI-LSNAVEHKLLISKSELSCAF 189
Query: 390 RHE 398
HE
Sbjct: 190 SHE 192
>AF067211-16|AAC16988.3| 399|Caenorhabditis elegans Hypothetical
protein B0205.4 protein.
Length = 399
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -3
Query: 366 YSITSRTLLHSIYLGLCT*IL 304
+S+T R+L HSI++GLC IL
Sbjct: 4 FSVT-RSLYHSIFIGLCVYIL 23
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,363,193
Number of Sequences: 27780
Number of extensions: 231683
Number of successful extensions: 684
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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