Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G08f
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.4  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 160 YNIIYFMYCNVYNMCIISPFL 98
           YNI+YF    VY    I+P L
Sbjct: 330 YNILYFCRIMVYLNSAINPIL 350



 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 53  NILYFCLILI 82
           NILYFC I++
Sbjct: 331 NILYFCRIMV 340


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -3

Query: 129 YIICVL*VHFSQCNTQIKIRQKYRILVDAVSRKV 28
           Y  C L V    CN  +  +Q+Y+++ + ++ ++
Sbjct: 173 YGFCYLWVLILICNIALAFKQRYQLINEQMAVRI 206


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -1

Query: 470 NCTHILALIYPNLPITRNNFYQK 402
           NC H++    P+L +    F  K
Sbjct: 205 NCNHLMTKYEPDLDMNHPGFADK 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,707
Number of Sequences: 336
Number of extensions: 1907
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)