Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G08f
         (509 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule as...    30   1.6  
AY094825-1|AAM11178.1|  877|Drosophila melanogaster LD39479p pro...    30   1.6  
AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA...    30   1.6  

>U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule
            associated protein protein.
          Length = 1861

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -1

Query: 428  ITRNNFYQKGLSVEKNLYKIYTAIKCNLNRLKLFQSYKRIKNASYLEASRYLRIKQYI-N 252
            I RN++Y    S+ KN+  +   ++  +   +  ++Y R++NAS L   RY   +Q I +
Sbjct: 1123 IDRNHYY----SLRKNVICLQQRLRAIMKMREQRENYLRLRNASILVQKRYRMRQQMIQD 1178

Query: 251  RNTH 240
            RN +
Sbjct: 1179 RNAY 1182


>AY094825-1|AAM11178.1|  877|Drosophila melanogaster LD39479p
           protein.
          Length = 877

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -1

Query: 428 ITRNNFYQKGLSVEKNLYKIYTAIKCNLNRLKLFQSYKRIKNASYLEASRYLRIKQYI-N 252
           I RN++Y    S+ KN+  +   ++  +   +  ++Y R++NAS L   RY   +Q I +
Sbjct: 490 IDRNHYY----SLRKNVICLQQRLRAIMKMREQRENYLRLRNASILVQKRYRMRQQMIQD 545

Query: 251 RNTH 240
           RN +
Sbjct: 546 RNAY 549


>AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA
            protein.
          Length = 1954

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -1

Query: 428  ITRNNFYQKGLSVEKNLYKIYTAIKCNLNRLKLFQSYKRIKNASYLEASRYLRIKQYI-N 252
            I RN++Y    S+ KN+  +   ++  +   +  ++Y R++NAS L   RY   +Q I +
Sbjct: 1216 IDRNHYY----SLRKNVICLQQRLRAIMKMREQRENYLRLRNASILVQKRYRMRQQMIQD 1271

Query: 251  RNTH 240
            RN +
Sbjct: 1272 RNAY 1275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,067,664
Number of Sequences: 53049
Number of extensions: 268123
Number of successful extensions: 383
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)