Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G07f
         (373 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC107575-1|AAI07576.1|   72|Homo sapiens transmembrane protein 1...   121   6e-28
BC028585-1|AAH28585.1|   72|Homo sapiens transmembrane protein 1...   121   6e-28
BC026285-1|AAH26285.1|   72|Homo sapiens transmembrane protein 1...   121   6e-28
BC067116-1|AAH67116.1|   74|Homo sapiens chromosome 1 open readi...    48   7e-06
BC066918-1|AAH66918.1|   74|Homo sapiens chromosome 1 open readi...    48   7e-06
BC065186-1|AAH65186.1|   74|Homo sapiens chromosome 1 open readi...    48   7e-06
BC008739-1|AAH08739.1|   74|Homo sapiens chromosome 1 open readi...    48   7e-06
AL356488-5|CAI19043.1|   74|Homo sapiens chromosome 1 open readi...    48   7e-06
AF164793-1|AAF80757.1|   74|Homo sapiens protein x 013 protein.        48   7e-06

>BC107575-1|AAI07576.1|   72|Homo sapiens transmembrane protein 167
           protein.
          Length = 72

 Score =  121 bits (292), Expect = 6e-28
 Identities = 54/71 (76%), Positives = 59/71 (83%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTGLLGTFWKCARIGERKSPYVAVC 215
           MSAIFNFQ         ICTCAY+RS  PS++DRNKTGLLG FWKCARIGERKSPYVAVC
Sbjct: 1   MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60

Query: 216 CILMAFSILFL 248
           CI+MAFSILF+
Sbjct: 61  CIVMAFSILFI 71


>BC028585-1|AAH28585.1|   72|Homo sapiens transmembrane protein 167
           protein.
          Length = 72

 Score =  121 bits (292), Expect = 6e-28
 Identities = 54/71 (76%), Positives = 59/71 (83%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTGLLGTFWKCARIGERKSPYVAVC 215
           MSAIFNFQ         ICTCAY+RS  PS++DRNKTGLLG FWKCARIGERKSPYVAVC
Sbjct: 1   MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60

Query: 216 CILMAFSILFL 248
           CI+MAFSILF+
Sbjct: 61  CIVMAFSILFI 71


>BC026285-1|AAH26285.1|   72|Homo sapiens transmembrane protein 167
           protein.
          Length = 72

 Score =  121 bits (292), Expect = 6e-28
 Identities = 54/71 (76%), Positives = 59/71 (83%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTGLLGTFWKCARIGERKSPYVAVC 215
           MSAIFNFQ         ICTCAY+RS  PS++DRNKTGLLG FWKCARIGERKSPYVAVC
Sbjct: 1   MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60

Query: 216 CILMAFSILFL 248
           CI+MAFSILF+
Sbjct: 61  CIVMAFSILFI 71


>BC067116-1|AAH67116.1|   74|Homo sapiens chromosome 1 open reading
           frame 119 protein.
          Length = 74

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 209
           M+ +++           +CTCAY +      + +   K G+ G F+K A IG R    VA
Sbjct: 1   MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60

Query: 210 VCCILMAFSILFL 248
           + C++MAF +LF+
Sbjct: 61  IACVVMAFYVLFI 73


>BC066918-1|AAH66918.1|   74|Homo sapiens chromosome 1 open reading
           frame 119 protein.
          Length = 74

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 209
           M+ +++           +CTCAY +      + +   K G+ G F+K A IG R    VA
Sbjct: 1   MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60

Query: 210 VCCILMAFSILFL 248
           + C++MAF +LF+
Sbjct: 61  IACVVMAFYVLFI 73


>BC065186-1|AAH65186.1|   74|Homo sapiens chromosome 1 open reading
           frame 119 protein.
          Length = 74

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 209
           M+ +++           +CTCAY +      + +   K G+ G F+K A IG R    VA
Sbjct: 1   MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60

Query: 210 VCCILMAFSILFL 248
           + C++MAF +LF+
Sbjct: 61  IACVVMAFYVLFI 73


>BC008739-1|AAH08739.1|   74|Homo sapiens chromosome 1 open reading
           frame 119 protein.
          Length = 74

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 209
           M+ +++           +CTCAY +      + +   K G+ G F+K A IG R    VA
Sbjct: 1   MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60

Query: 210 VCCILMAFSILFL 248
           + C++MAF +LF+
Sbjct: 61  IACVVMAFYVLFI 73


>AL356488-5|CAI19043.1|   74|Homo sapiens chromosome 1 open reading
           frame 119 protein.
          Length = 74

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 209
           M+ +++           +CTCAY +      + +   K G+ G F+K A IG R    VA
Sbjct: 1   MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60

Query: 210 VCCILMAFSILFL 248
           + C++MAF +LF+
Sbjct: 61  IACVVMAFYVLFI 73


>AF164793-1|AAF80757.1|   74|Homo sapiens protein x 013 protein.
          Length = 74

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLGTFWKCARIGERKSPYVA 209
           M+ +++           +CTCAY +      + +   K G+ G F+K A IG R    VA
Sbjct: 1   MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60

Query: 210 VCCILMAFSILFL 248
           + C++MAF +LF+
Sbjct: 61  IACVVMAFYVLFI 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,223,807
Number of Sequences: 237096
Number of extensions: 956510
Number of successful extensions: 2020
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2014
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)