Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G07f
         (373 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g20165.1 68418.m02401 expressed protein                             79   1e-15
At5g57800.1 68418.m07228 CER1 protein, putative (WAX2) similar t...    29   0.99 

>At5g20165.1 68418.m02401 expressed protein
          Length = 70

 Score = 78.6 bits (185), Expect = 1e-15
 Identities = 36/70 (51%), Positives = 46/70 (65%)
 Frame = +3

Query: 36  MSAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTGLLGTFWKCARIGERKSPYVAVC 215
           MSA+FNF          ICTC YL+  FP+I+++ KTG  G FWK ARIGER SP+V+  
Sbjct: 1   MSALFNFHSFLTVVLLVICTCTYLKMQFPAILEQ-KTGFRGFFWKAARIGERLSPWVSAG 59

Query: 216 CILMAFSILF 245
           C +M  SI+F
Sbjct: 60  CFMMGVSIIF 69


>At5g57800.1 68418.m07228 CER1 protein, putative (WAX2) similar to
           maize glossy1 homolog GI:2213643 from [Oryza sativa];
           contains Pfam profile PF01598: Sterol desaturase
          Length = 632

 Score = 29.1 bits (62), Expect = 0.99
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = +1

Query: 154 WEHFGNVQELVNANPPMLQSVVY*WPFQYCSSH-----KIVTKCGLK 279
           WE+FGN++ L+ A  P+   VVY W ++   S       I+  CGLK
Sbjct: 10  WENFGNLKYLLYA--PLAAQVVYSWVYEEDISKVLWCIHILIICGLK 54


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,639,720
Number of Sequences: 28952
Number of extensions: 141344
Number of successful extensions: 223
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 497853200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)