Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.7  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 278 FINVLPDTRVYLTTASFSGFFYCLVRVVRY 189
           F++VLP     +T   + GF  C  +VV+Y
Sbjct: 91  FLSVLPQLAWDITYRFYGGFLLC--KVVKY 118


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 206  PDNKKSQRSWQWSNKPLYQ 262
            P +K S  SWQ   KP Y+
Sbjct: 1157 PGHKPSTSSWQKPTKPSYR 1175


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 267 DINKVVDFIDI 299
           +INKVVDFI+I
Sbjct: 189 EINKVVDFINI 199


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 160 SANQSLTPRRNHPPTESGIGKLDR 89
           + N    P R+HP  E  + +LDR
Sbjct: 342 NGNAHNCPSRSHPVWEIVMNELDR 365


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 160 SANQSLTPRRNHPPTESGIGKLDR 89
           + N    P R+HP  E  + +LDR
Sbjct: 349 NGNAHNCPSRSHPVWEIVMNELDR 372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,444
Number of Sequences: 336
Number of extensions: 2650
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)