Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G05f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   4.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.2  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 330 RCWRSKNWPYCDGSHGPHNKETG 398
           + W   +  Y DG+  PHN++ G
Sbjct: 823 KLWDGYSLLYVDGNDYPHNQDLG 845


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 336  WRSKNWPYCDGSHGPHNKETGD 401
            W   +W   D  H P N E+G+
Sbjct: 1188 WHGPDWLVKDPKHWPKNIESGN 1209


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 378 PHNKETGDNTGPVVVRHKP 434
           PH ++TG    P  + H+P
Sbjct: 146 PHQRDTGPALFPAPISHRP 164


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 417  RLGRCCRQFLYYEDRDYHHNKANFYSS 337
            R G     FL Y+     ++ ANFYSS
Sbjct: 1308 RRGASSPSFLRYDSDCSSNSSANFYSS 1334


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,752
Number of Sequences: 2352
Number of extensions: 12794
Number of successful extensions: 222
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)