Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302G05f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537971-1|CAD97935.1| 150|Homo sapiens hypothetical protein pr... 120 4e-27
BC032300-1|AAH32300.1| 135|Homo sapiens CDGSH iron sulfur domai... 120 4e-27
BC059168-1|AAH59168.1| 108|Homo sapiens CDGSH iron sulfur domai... 96 6e-20
BC008474-1|AAH08474.1| 108|Homo sapiens zinc finger, CDGSH-type... 96 6e-20
BC007043-1|AAH07043.1| 108|Homo sapiens zinc finger, CDGSH-type... 96 6e-20
BC005962-1|AAH05962.1| 108|Homo sapiens zinc finger, CDGSH-type... 96 6e-20
AY960578-1|AAY32336.1| 108|Homo sapiens zinc finger CDGSH-type ... 96 6e-20
AF220049-1|AAF67642.1| 108|Homo sapiens uncharacterized hematop... 96 6e-20
BC014558-1|AAH14558.1| 627|Homo sapiens fem-1 homolog b (C. ele... 31 1.9
BC010122-1|AAH10122.1| 627|Homo sapiens fem-1 homolog b (C. ele... 31 1.9
AF204883-1|AAF69303.1| 627|Homo sapiens FEM1 beta protein. 31 1.9
AF178632-1|AAF05314.1| 627|Homo sapiens FEM-1-like death recept... 31 1.9
AB007856-1|BAA23692.2| 627|Homo sapiens KIAA0396 protein. 31 1.9
S66431-1|AAB28544.1| 1722|Homo sapiens retinoblastoma binding pr... 31 2.4
BC003517-1|AAH03517.2| 533|Homo sapiens ATXN7L1 protein protein. 31 3.2
Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein. 29 9.9
AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein. 29 9.9
AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein. 29 9.9
AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein. 29 9.9
>BX537971-1|CAD97935.1| 150|Homo sapiens hypothetical protein
protein.
Length = 150
Score = 120 bits (288), Expect = 4e-27
Identities = 57/128 (44%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Frame = +3
Query: 54 VSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQT-IKKARE 230
V+ +VKV +P YL LP+P+S+ G+ RL V +WL L+P V+ + Y + + + K ++
Sbjct: 21 VARIVKVQLPAYLKRLPVPESITGFARLTVSEWLRLLPFLGVLALLGYLAVRPFLPKKKQ 80
Query: 231 AGSGQINPCIRKDINKVVDFIDIEDIT-EKASLCRCWRSKNWPYCDGSHGPHNKETGDNT 407
IN I+K+ KVV+ I+IED+ KA+ CRCWRSK +P CDGSH HN+ TGDN
Sbjct: 81 QKDSLINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNV 140
Query: 408 GPVVVRHK 431
GP++++ K
Sbjct: 141 GPLILKKK 148
>BC032300-1|AAH32300.1| 135|Homo sapiens CDGSH iron sulfur domain 2
protein.
Length = 135
Score = 120 bits (288), Expect = 4e-27
Identities = 57/128 (44%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Frame = +3
Query: 54 VSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQT-IKKARE 230
V+ +VKV +P YL LP+P+S+ G+ RL V +WL L+P V+ + Y + + + K ++
Sbjct: 6 VARIVKVQLPAYLKRLPVPESITGFARLTVSEWLRLLPFLGVLALLGYLAVRPFLPKKKQ 65
Query: 231 AGSGQINPCIRKDINKVVDFIDIEDIT-EKASLCRCWRSKNWPYCDGSHGPHNKETGDNT 407
IN I+K+ KVV+ I+IED+ KA+ CRCWRSK +P CDGSH HN+ TGDN
Sbjct: 66 QKDSLINLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNV 125
Query: 408 GPVVVRHK 431
GP++++ K
Sbjct: 126 GPLILKKK 133
>BC059168-1|AAH59168.1| 108|Homo sapiens CDGSH iron sulfur domain 1
protein.
Length = 108
Score = 96.3 bits (229), Expect = 6e-20
Identities = 39/95 (41%), Positives = 57/95 (60%)
Frame = +3
Query: 147 DWLALIPPTVVVGGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASL 326
+W+A + I Y +Y+ IN I+KD K+V D+ED+ +KA
Sbjct: 12 EWIAAVTIAAGTAAIGYLAYKRFYVKDHRNKAMINLHIQKDNPKIVHAFDMEDLGDKAVY 71
Query: 327 CRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVRHK 431
CRCWRSK +P+CDG+H HN+ETGDN GP++++ K
Sbjct: 72 CRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK 106
>BC008474-1|AAH08474.1| 108|Homo sapiens zinc finger, CDGSH-type
domain 1 protein.
Length = 108
Score = 96.3 bits (229), Expect = 6e-20
Identities = 39/95 (41%), Positives = 57/95 (60%)
Frame = +3
Query: 147 DWLALIPPTVVVGGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASL 326
+W+A + I Y +Y+ IN I+KD K+V D+ED+ +KA
Sbjct: 12 EWIAAVTIAAGTAAIGYLAYKRFYVKDHRNKAMINLHIQKDNPKIVHAFDMEDLGDKAVY 71
Query: 327 CRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVRHK 431
CRCWRSK +P+CDG+H HN+ETGDN GP++++ K
Sbjct: 72 CRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK 106
>BC007043-1|AAH07043.1| 108|Homo sapiens zinc finger, CDGSH-type
domain 1 protein.
Length = 108
Score = 96.3 bits (229), Expect = 6e-20
Identities = 39/95 (41%), Positives = 57/95 (60%)
Frame = +3
Query: 147 DWLALIPPTVVVGGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASL 326
+W+A + I Y +Y+ IN I+KD K+V D+ED+ +KA
Sbjct: 12 EWIAAVTIAAGTAAIGYLAYKRFYVKDHRNKAMINLHIQKDNPKIVHAFDMEDLGDKAVY 71
Query: 327 CRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVRHK 431
CRCWRSK +P+CDG+H HN+ETGDN GP++++ K
Sbjct: 72 CRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK 106
>BC005962-1|AAH05962.1| 108|Homo sapiens zinc finger, CDGSH-type
domain 1 protein.
Length = 108
Score = 96.3 bits (229), Expect = 6e-20
Identities = 39/95 (41%), Positives = 57/95 (60%)
Frame = +3
Query: 147 DWLALIPPTVVVGGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASL 326
+W+A + I Y +Y+ IN I+KD K+V D+ED+ +KA
Sbjct: 12 EWIAAVTIAAGTAAIGYLAYKRFYVKDHRNKAMINLHIQKDNPKIVHAFDMEDLGDKAVY 71
Query: 327 CRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVRHK 431
CRCWRSK +P+CDG+H HN+ETGDN GP++++ K
Sbjct: 72 CRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK 106
>AY960578-1|AAY32336.1| 108|Homo sapiens zinc finger CDGSH-type
domain 1 protein.
Length = 108
Score = 96.3 bits (229), Expect = 6e-20
Identities = 39/95 (41%), Positives = 57/95 (60%)
Frame = +3
Query: 147 DWLALIPPTVVVGGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASL 326
+W+A + I Y +Y+ IN I+KD K+V D+ED+ +KA
Sbjct: 12 EWIAAVTIAAGTAAIGYLAYKRFYVKDHRNKAMINLHIQKDNPKIVHAFDMEDLGDKAVY 71
Query: 327 CRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVRHK 431
CRCWRSK +P+CDG+H HN+ETGDN GP++++ K
Sbjct: 72 CRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK 106
>AF220049-1|AAF67642.1| 108|Homo sapiens uncharacterized
hematopoietic stem/progenitor cells protein MDS029
protein.
Length = 108
Score = 96.3 bits (229), Expect = 6e-20
Identities = 39/95 (41%), Positives = 57/95 (60%)
Frame = +3
Query: 147 DWLALIPPTVVVGGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASL 326
+W+A + I Y +Y+ IN I+KD K+V D+ED+ +KA
Sbjct: 12 EWIAAVTIAAGTAAIGYLAYKRFYVKDHRNKAMINLHIQKDNPKIVHAFDMEDLGDKAVY 71
Query: 327 CRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVRHK 431
CRCWRSK +P+CDG+H HN+ETGDN GP++++ K
Sbjct: 72 CRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK 106
>BC014558-1|AAH14558.1| 627|Homo sapiens fem-1 homolog b (C.
elegans) protein.
Length = 627
Score = 31.5 bits (68), Expect = 1.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 510 IXQCNNSFLHNFFENYTCYLFVFSWLVCV 424
+ +++ +HN +NY C L+ F +LVC+
Sbjct: 425 VKNISDADVHNAMDNYECNLYTFLYLVCI 453
>BC010122-1|AAH10122.1| 627|Homo sapiens fem-1 homolog b (C.
elegans) protein.
Length = 627
Score = 31.5 bits (68), Expect = 1.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 510 IXQCNNSFLHNFFENYTCYLFVFSWLVCV 424
+ +++ +HN +NY C L+ F +LVC+
Sbjct: 425 VKNISDADVHNAMDNYECNLYTFLYLVCI 453
>AF204883-1|AAF69303.1| 627|Homo sapiens FEM1 beta protein.
Length = 627
Score = 31.5 bits (68), Expect = 1.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 510 IXQCNNSFLHNFFENYTCYLFVFSWLVCV 424
+ +++ +HN +NY C L+ F +LVC+
Sbjct: 425 VKNISDADVHNAMDNYECNLYTFLYLVCI 453
>AF178632-1|AAF05314.1| 627|Homo sapiens FEM-1-like death receptor
binding protein protein.
Length = 627
Score = 31.5 bits (68), Expect = 1.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 510 IXQCNNSFLHNFFENYTCYLFVFSWLVCV 424
+ +++ +HN +NY C L+ F +LVC+
Sbjct: 425 VKNISDADVHNAMDNYECNLYTFLYLVCI 453
>AB007856-1|BAA23692.2| 627|Homo sapiens KIAA0396 protein.
Length = 627
Score = 31.5 bits (68), Expect = 1.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 510 IXQCNNSFLHNFFENYTCYLFVFSWLVCV 424
+ +++ +HN +NY C L+ F +LVC+
Sbjct: 425 VKNISDADVHNAMDNYECNLYTFLYLVCI 453
>S66431-1|AAB28544.1| 1722|Homo sapiens retinoblastoma binding protein
2 protein.
Length = 1722
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 252 PCIRKDINKVVDFIDIEDITEKASLCRCWRSK-NWPYCDG 368
PC K + V +I++I+ K+ LC C+ K +W CDG
Sbjct: 1623 PCKDKGVVFVTKKREIKNISFKSVLCDCFSKKVDWVQCDG 1662
>BC003517-1|AAH03517.2| 533|Homo sapiens ATXN7L1 protein protein.
Length = 533
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +3
Query: 33 KSLKMYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQT 212
K KM ++++ K P+ L+ P+PD V V+D LA PP+ +GG ++
Sbjct: 451 KITKMPGMNSVHKKNPPSLLA--PVPDPVNSTSSRQVRDLLA--PPSPALGGRGSWAAPL 506
Query: 213 IKKAREAGSGQINPCI 260
+ +A G+ + P +
Sbjct: 507 LSRAAPTGNTSLIPVL 522
>Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 317 LLSYILN-VNKVHNFINVLPDTRVYLTTASFSGFFYCLVRVV 195
L YIL+ + K N I + D+ YLT+ ++ YC++ +
Sbjct: 579 LFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEAL 620
>AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 317 LLSYILN-VNKVHNFINVLPDTRVYLTTASFSGFFYCLVRVV 195
L YIL+ + K N I + D+ YLT+ ++ YC++ +
Sbjct: 579 LFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEAL 620
>AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 317 LLSYILN-VNKVHNFINVLPDTRVYLTTASFSGFFYCLVRVV 195
L YIL+ + K N I + D+ YLT+ ++ YC++ +
Sbjct: 579 LFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEAL 620
>AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein.
Length = 1478
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 317 LLSYILN-VNKVHNFINVLPDTRVYLTTASFSGFFYCLVRVV 195
L YIL+ + K N I + D+ YLT+ ++ YC++ +
Sbjct: 464 LFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEAL 505
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,240,347
Number of Sequences: 237096
Number of extensions: 1614121
Number of successful extensions: 3339
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3335
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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