Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G05f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical p...   101   2e-22
Z66521-17|CAI46628.1|  103|Caenorhabditis elegans Hypothetical p...   101   2e-22
AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like ...   101   2e-22
Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical pr...    34   0.054
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass...    31   0.66 
Z93397-5|CAD89745.1|  375|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical pr...    28   3.5  

>Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical
           protein W02B12.15b protein.
          Length = 134

 Score =  101 bits (243), Expect = 2e-22
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +3

Query: 237 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 416
           S + N  I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 68  SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 127

Query: 417 VVR 425
           +V+
Sbjct: 128 IVK 130


>Z66521-17|CAI46628.1|  103|Caenorhabditis elegans Hypothetical
           protein W02B12.15a protein.
          Length = 103

 Score =  101 bits (243), Expect = 2e-22
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +3

Query: 237 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 416
           S + N  I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 37  SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 96

Query: 417 VVR 425
           +V+
Sbjct: 97  IVK 99


>AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like
           protein protein.
          Length = 605

 Score =  101 bits (243), Expect = 2e-22
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +3

Query: 237 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 416
           S + N  I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 68  SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 127

Query: 417 VVR 425
           +V+
Sbjct: 128 IVK 130


>Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical
           protein M88.7 protein.
          Length = 160

 Score = 34.3 bits (75), Expect = 0.054
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +3

Query: 276 KVVDFIDIEDITEKASLCRCWRSKNWPYCDGSH 374
           K V FI  +D+T    LC C ++ N P+CDGSH
Sbjct: 116 KPVRFIPDKDMT--VWLCNCKQTNNRPFCDGSH 146


>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 213 protein.
          Length = 1437

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 317 LLSYILN-VNKVHNFINVLPDTRVYLTTASFSGFFYCLV 204
           +LSY+L+ V    NFI  + D+  YLT+  F    YC++
Sbjct: 560 VLSYLLSQVQTFDNFIGPVVDSLRYLTSLEFDVLTYCII 598


>Z93397-5|CAD89745.1|  375|Caenorhabditis elegans Hypothetical
           protein ZC482.8 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 299 NVNKVHNFINVLPD-TRVYLTTASFSGFFYCLVRVVRYT 186
           N++K    + VL D T+     ASFSGFF  LV +V  T
Sbjct: 32  NLHKHFELVTVLTDVTKQLYDIASFSGFFLNLVHLVILT 70


>Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical
           protein F57A8.5 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 76  PFPTICRACRFQILLADGFVLEL 144
           P+P  C++CRFQ  L  G  LE+
Sbjct: 65  PYPLKCQSCRFQRCLDAGMYLEV 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,434,236
Number of Sequences: 27780
Number of extensions: 241395
Number of successful extensions: 703
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)