Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302G04f
         (483 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.42 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   6.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.9  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   9.1  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +1

Query: 334 HRHQRQDAHPHRGEPLRDRPRGHQAGIPRG 423
           H+H     HPHRG     +   H  G   G
Sbjct: 319 HQHHPSQYHPHRGSSPHHQHGNHTMGPTMG 348


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 310 APVLLDEGHRHQRQDAHPH 366
           +P L++    HQ    HPH
Sbjct: 160 SPPLVESQMHHQMHTQHPH 178


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 208 FSGQSFVLGEDLSQLLIGASDKDGV 134
           F G+  + G+DL    I A D +GV
Sbjct: 288 FFGEKALQGDDLRTANIIADDPEGV 312


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 27   PIAMKTRASMKAQLKPMLKHWPPLVKVNGEPTNQSS 134
            P   + +   + Q +  L H+P L  +   PT++ S
Sbjct: 1450 PQQQQQQQQQQQQQQQQLNHYPDLHNLYAVPTDKKS 1485


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 12/41 (29%), Positives = 14/41 (34%)
 Frame = -3

Query: 454 HYRGELGTGPPLEECLLDVP*VDLGAAHHDADERLVVGADA 332
           H      T P         P V   AAHH   ++  V A A
Sbjct: 71  HSGSSASTSPAARTTSSMYPYVSAAAAHHHHQQQQAVAAAA 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,260
Number of Sequences: 438
Number of extensions: 2382
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)