Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302G02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical ... 56 2e-08
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 34 0.054
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 34 0.054
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 34 0.054
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 32 0.22
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 32 0.22
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 32 0.29
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 32 0.29
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 32 0.29
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 31 0.50
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 29 1.5
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 28 3.5
U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF099917-5|AAC68783.2| 219|Caenorhabditis elegans F-box a prote... 27 6.2
AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical ... 27 6.2
>AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical
protein M04F3.4 protein.
Length = 172
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +3
Query: 372 PQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
P +QQ F +VDKD+SG I+S EL++AL N F+ C LMIGMFD +
Sbjct: 6 PNLQQIFSSVDKDRSGQISSDELQTALSNGTWNPFNPETCRLMIGMFDSN 55
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 34.3 bits (75), Expect = 0.054
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 375 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADID 132
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 34.3 bits (75), Expect = 0.054
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 375 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADID 132
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 34.3 bits (75), Expect = 0.054
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 375 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D
Sbjct: 34 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADID 81
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 390 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
F+ DKD +G+IT+ E + + G+ FSE + +I DKD
Sbjct: 101 FKVFDKDGNGYITAQEFKH-FMTTMGERFSEEEVDEIIREVDKD 143
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 375 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
Q +++F DK+ G+I +T++ ++ GQ F E +I FD D
Sbjct: 19 QFRKYFNMFDKEGKGYIRATQV-GQILRTMGQAFEERDLKQLIKEFDAD 66
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 375 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
++++ FR DK+ +G+I ++LR ++ A SE + MI D D
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRD-ILRALDDNVSEEELDEMIAEIDAD 143
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 375 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
Q +++F DK+ G+I +T++ ++ GQ F E +I FD D
Sbjct: 19 QFRKYFNMFDKEGKGYIRATQV-GQILRTMGQAFEERDLKQLIKEFDAD 66
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 375 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
++++ FR DK+ +G+I ++LR ++ A SE + MI D D
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRD-ILRALDDNVSEEELDEMIAEIDAD 143
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 378 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
+++ FR D+D +GFIT+ E R + + G FS+ + +I D D
Sbjct: 109 IREAFRVFDRDGNGFITADEFRYFMTH-MGDQFSDQEVDEIIAEIDID 155
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 378 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 521
+++ FR D+D +GFIT+ E R + + G FS+ + +I D D
Sbjct: 109 IREAFRVFDRDGNGFITADEFRYFMTH-MGDQFSDQEVDEIIAEIDID 155
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 31.9 bits (69), Expect = 0.29
Identities = 23/69 (33%), Positives = 26/69 (37%)
Frame = +3
Query: 264 YNSGYPGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQVQQWFRAVDKDQSGFITSTELR 443
Y GY G YGG PP Q + G P Q +QW R D I E
Sbjct: 246 YWDGYQG---YGGPPPSQQQQQQGGGPVTAPQSMQMAQQEQWGRVGTNDLMNVIAQVEKS 302
Query: 444 SALVNAQGQ 470
SA A+ Q
Sbjct: 303 SAECKARIQ 311
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 258 MAYNSGYPGQAA-YGGMPPGQLEIGHGP 338
M GYP Q A YGG+PP +GP
Sbjct: 115 MMRQGGYPNQMAMYGGVPPPHYPSSNGP 142
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = +3
Query: 255 QMAYNSGYPGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQVQQW 389
QM GYPGQ Y GMPP Q G P GG Q Q W
Sbjct: 711 QMVQQPGYPGQ-GYPGMPPPQGAFPPGYLP----GGAQPTQQQIW 750
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 375 QVQQWFRAVDKDQSGFITSTELRSALVNAQ 464
++++ F+ +DKD GFI+ EL++ + N Q
Sbjct: 280 EIRKVFQDLDKDGDGFISVAELQAVMTNLQ 309
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +3
Query: 279 PGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQVQQWF 392
P YGGMPPG IG GP P GG+ QQ F
Sbjct: 45 PPANGYGGMPPGPPNIG-GPQPP---GGSQQKGQQQQF 78
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +3
Query: 279 PGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQVQQWF 392
P YGGMPPG IG GP P GG+ QQ F
Sbjct: 45 PPANGYGGMPPGPPNIG-GPQPP---GGSQQKGQQQQF 78
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 402 DKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFD 515
DK+ GFITS ELR L + E L+ G D
Sbjct: 91 DKEGEGFITSAELRQVLTTMGDKLSDEEFDKLVAGQED 128
>U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical
protein M03E7.2 protein.
Length = 122
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 294 YGGMPPGQLEIGHGPYPSIGVGG 362
YGGMPP G PY G+GG
Sbjct: 53 YGGMPPPMPPPGMSPYGMGGMGG 75
>AF099917-5|AAC68783.2| 219|Caenorhabditis elegans F-box a protein
protein 24 protein.
Length = 219
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +1
Query: 328 DMDRTLPLELGVLLRPKYSSGSEL*IKINLDS 423
D ++ P+E+ + +P Y+ G+E I+ ++D+
Sbjct: 166 DKSKSNPIEIAKVFKPDYAGGNEFLIEYSIDN 197
>AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical
protein H10E21.4 protein.
Length = 236
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 378 VQQWFRAVDKDQSGFITSTEL 440
VQQ F +DK+Q G++T EL
Sbjct: 196 VQQIFAMLDKNQDGYLTENEL 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,864,817
Number of Sequences: 27780
Number of extensions: 245878
Number of successful extensions: 626
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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