Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302F12f
(444 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q29HU7 Cluster: GA10761-PA; n=3; Diptera|Rep: GA10761-P... 171 6e-42
UniRef50_Q9VY86 Cluster: TM2 domain-containing protein CG11103 p... 168 4e-41
UniRef50_Q9BX73 Cluster: TM2 domain-containing protein 2 precurs... 158 6e-38
UniRef50_Q4RGB7 Cluster: Chromosome 12 SCAF15104, whole genome s... 153 1e-36
UniRef50_UPI0000E480CC Cluster: PREDICTED: similar to TM2 domain... 142 4e-33
UniRef50_P61228 Cluster: TM2 domain-containing protein C02F5.13 ... 105 4e-22
UniRef50_Q5BTF3 Cluster: SJCHGC01602 protein; n=2; Schistosoma j... 87 2e-16
UniRef50_A2DVK4 Cluster: TM2 domain containing protein; n=1; Tri... 52 4e-06
UniRef50_Q9W2H1 Cluster: TM2 domain-containing protein CG10795 p... 50 3e-05
UniRef50_A2FYD7 Cluster: TM2 domain containing protein; n=1; Tri... 45 6e-04
UniRef50_Q9BRN9 Cluster: TM2 domain-containing protein 3 precurs... 45 6e-04
UniRef50_Q95QZ5 Cluster: TM2 domain-containing protein C41D11.9 ... 45 8e-04
UniRef50_UPI00005847F7 Cluster: PREDICTED: similar to conserved ... 42 0.005
UniRef50_A2DYP8 Cluster: TM2 domain containing protein; n=1; Tri... 42 0.005
UniRef50_UPI00015B6370 Cluster: PREDICTED: similar to conserved ... 42 0.008
UniRef50_A7RXA9 Cluster: Predicted protein; n=1; Nematostella ve... 41 0.010
UniRef50_A2EP10 Cluster: TM2 domain containing protein; n=1; Tri... 41 0.010
UniRef50_Q95PJ8 Cluster: TM2 domain-containing protein Y66D12A.2... 40 0.032
UniRef50_A4AFV7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13
UniRef50_Q5DFA0 Cluster: SJCHGC08970 protein; n=1; Schistosoma j... 37 0.17
UniRef50_A1R8B7 Cluster: Putative TM2 domain family protein; n=1... 33 2.1
UniRef50_Q2B6X8 Cluster: Methyl-accepting chemotaxis protein; n=... 32 4.8
UniRef50_UPI000050FE16 Cluster: COG5651: PPE-repeat proteins; n=... 32 6.4
UniRef50_Q5QCQ1 Cluster: FliL; n=2; Betaproteobacteria|Rep: FliL... 32 6.4
UniRef50_A3PTH5 Cluster: Conserved hypothetical proline and thre... 32 6.4
UniRef50_UPI000050FA70 Cluster: hypothetical protein BlinB010009... 31 8.5
UniRef50_A2DYC3 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
>UniRef50_Q29HU7 Cluster: GA10761-PA; n=3; Diptera|Rep: GA10761-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 214
Score = 171 bits (416), Expect = 6e-42
Identities = 74/127 (58%), Positives = 90/127 (70%)
Frame = +2
Query: 53 GIIKAKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFG 232
G + S S + PLGP V CS+LP +FL+C +PIDH+ N TAR G+GC++FG
Sbjct: 48 GSSSSSGSSSSSSNSAFHPLGPNVMCSFLPRDFLECKDPIDHRDNITARIEKGYGCLRFG 107
Query: 233 GVRYDQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDR 412
G Y+ VE KVQC I+CYG R+F R+G PCVRY+ HYF TTLIYS+LLGFLGMDR
Sbjct: 108 GSSYEAVEHTKVQCTVYSDIDCYGDRTFFREGVPCVRYTDHYFVTTLIYSMLLGFLGMDR 167
Query: 413 FCLGQTG 433
FCLGQTG
Sbjct: 168 FCLGQTG 174
>UniRef50_Q9VY86 Cluster: TM2 domain-containing protein CG11103
precursor; n=3; Eumetazoa|Rep: TM2 domain-containing
protein CG11103 precursor - Drosophila melanogaster
(Fruit fly)
Length = 224
Score = 168 bits (409), Expect = 4e-41
Identities = 74/123 (60%), Positives = 89/123 (72%)
Frame = +2
Query: 65 AKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRY 244
A S S + PLGP V CS+LP +FLDC +P+DH+ N TA+Q +GC+KFGG Y
Sbjct: 62 ASSASGGAGNSAFYPLGPNVMCSFLPRDFLDCKDPVDHRENATAQQEKKYGCLKFGGSTY 121
Query: 245 DQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 424
++VE A V C IECYG+R+F R G PCVRY+ HYF TTLIYS+LLGFLGMDRFCLG
Sbjct: 122 EEVEHAMVWCTVFADIECYGNRTFLRAGVPCVRYTDHYFVTTLIYSMLLGFLGMDRFCLG 181
Query: 425 QTG 433
QTG
Sbjct: 182 QTG 184
>UniRef50_Q9BX73 Cluster: TM2 domain-containing protein 2 precursor;
n=18; Coelomata|Rep: TM2 domain-containing protein 2
precursor - Homo sapiens (Human)
Length = 214
Score = 158 bits (383), Expect = 6e-38
Identities = 70/137 (51%), Positives = 89/137 (64%)
Frame = +2
Query: 23 STAVTVLFITGIIKAKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQ 202
+TA L G + + S E P P++ CSYLP EF++C++P+DH GN TA Q
Sbjct: 38 ATAEPELTSAGAAQPEGPGGAASWEYGDPHSPVILCSYLPDEFIECEDPVDHVGNATASQ 97
Query: 203 ATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYS 382
G+GC+KFGG Y VE VQC ALDGIEC R+F R+ PC++Y+GHYF TTL+YS
Sbjct: 98 ELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYS 157
Query: 383 ILLGFLGMDRFCLGQTG 433
LG G+DRFCLG TG
Sbjct: 158 FFLGCFGVDRFCLGHTG 174
>UniRef50_Q4RGB7 Cluster: Chromosome 12 SCAF15104, whole genome
shotgun sequence; n=4; Coelomata|Rep: Chromosome 12
SCAF15104, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 227
Score = 153 bits (372), Expect = 1e-36
Identities = 65/111 (58%), Positives = 76/111 (68%)
Frame = +2
Query: 101 YRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCKA 280
YRP P+V CSYLP EF+ C +P+DH GNH+A GHGCV +GG +V V C A
Sbjct: 77 YRPPSPVVLCSYLPEEFISCQDPVDHAGNHSAFLELGHGCVSWGGQTESEVNHTPVICSA 136
Query: 281 LDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQTG 433
LD IEC G R FPR PCV+Y+GHYF TTL+YS LG G+DRFCLG TG
Sbjct: 137 LDDIECAGPREFPRGQVPCVKYTGHYFITTLLYSFFLGCFGVDRFCLGHTG 187
>UniRef50_UPI0000E480CC Cluster: PREDICTED: similar to TM2 domain
containing 2; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to TM2 domain containing 2 -
Strongylocentrotus purpuratus
Length = 200
Score = 142 bits (343), Expect = 4e-33
Identities = 57/108 (52%), Positives = 80/108 (74%)
Frame = +2
Query: 101 YRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCKA 280
Y P+ PLVKCS+LP +F++CD P D KGN T R+ G GC K+G +Y V+K+ V C+
Sbjct: 52 YNPVEPLVKCSFLPDDFIECDAPEDLKGNETLRRELGTGCSKYGREKYQDVQKSPVICRV 111
Query: 281 LDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 424
L GIEC+G+R+F +D PC+++ G +F +TLI+SI LGF G+DRFC+G
Sbjct: 112 LPGIECHGNRTFIKDNIPCLKFEGQHFISTLIFSIFLGFFGVDRFCMG 159
>UniRef50_P61228 Cluster: TM2 domain-containing protein C02F5.13
precursor; n=2; Caenorhabditis|Rep: TM2
domain-containing protein C02F5.13 precursor -
Caenorhabditis elegans
Length = 210
Score = 105 bits (252), Expect = 4e-22
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
Frame = +2
Query: 107 PLGPLVKCSYLPLEFLDCDEPIDHKG-NHTARQATGHG------CVKFGGVRYDQVEKAK 265
PLGP+V+C +L F+ C++P+ G T +Q C+K GG R + VE
Sbjct: 56 PLGPVVECRFLENSFILCEDPVPLYGPGQTGQQPANESFRNEGKCLKMGGYRAEDVEFTN 115
Query: 266 VQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 424
V+C+ L IEC+G R+F + PC+ Y+GHYF TTL+YSI LG + +DRFCLG
Sbjct: 116 VKCRVLPCIECHGPRTFTKST-PCIIYNGHYFLTTLLYSIFLGVVAVDRFCLG 167
>UniRef50_Q5BTF3 Cluster: SJCHGC01602 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01602 protein - Schistosoma
japonicum (Blood fluke)
Length = 100
Score = 87.0 bits (206), Expect = 2e-16
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +2
Query: 272 CKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQTGHG 439
C ALD IECYG+R+F +PC+ + GHYF TT IYS+LLGFLG+DR CLG G G
Sbjct: 7 CHALDNIECYGNRTFLLPDYPCLHFKGHYFVTTFIYSLLLGFLGVDRLCLGHIGTG 62
>UniRef50_A2DVK4 Cluster: TM2 domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: TM2 domain containing
protein - Trichomonas vaginalis G3
Length = 178
Score = 52.4 bits (120), Expect = 4e-06
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +2
Query: 95 EPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFG-GVRYDQVEKAKVQ 271
E + P + C YLP +++C I H + A Q K G D+
Sbjct: 29 EEWDPTLSQIPCQYLPPRYVEC---ITHSFDKFANQFENGTLPKNGCPSTTDENAFGMAI 85
Query: 272 CKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 424
C L+GI C G + + +PC T +++S LLG G+DRF LG
Sbjct: 86 CHPLNGIYCIGEQYWINKTYPCYEPGEKSVVTAILFSFLLGIFGVDRFYLG 136
>UniRef50_Q9W2H1 Cluster: TM2 domain-containing protein CG10795
precursor; n=7; Endopterygota|Rep: TM2 domain-containing
protein CG10795 precursor - Drosophila melanogaster
(Fruit fly)
Length = 178
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 257 KAKVQCKALDGIECY--GSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQT 430
+A+V C A + I C G+ +F R+ PC +G++ TTL+ S+ LG G+DRF LG
Sbjct: 57 RARVWCIAANEINCTETGNATFTRE-VPCKWTNGYHLDTTLLLSVFLGMFGVDRFYLGYP 115
Query: 431 GHG 439
G G
Sbjct: 116 GIG 118
>UniRef50_A2FYD7 Cluster: TM2 domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: TM2 domain containing
protein - Trichomonas vaginalis G3
Length = 168
Score = 45.2 bits (102), Expect = 6e-04
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = +2
Query: 272 CKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQTGHG 439
C + +C GSRSF F C +G+ T + SIL G G DRF LG TG G
Sbjct: 79 CSVVATSQCLGSRSFSSQLF-CQTTTGYSHATAVAMSILFGGFGADRFYLGYTGFG 133
>UniRef50_Q9BRN9 Cluster: TM2 domain-containing protein 3 precursor;
n=31; Euteleostomi|Rep: TM2 domain-containing protein 3
precursor - Homo sapiens (Human)
Length = 247
Score = 45.2 bits (102), Expect = 6e-04
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 254 EKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQTG 433
++ C D + C G+R+FP+ + C G+ ++T L SI LG G DRF LGQ
Sbjct: 152 QRYPANCTVRDHVHCLGNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWR 210
Query: 434 HG 439
G
Sbjct: 211 EG 212
>UniRef50_Q95QZ5 Cluster: TM2 domain-containing protein C41D11.9
precursor; n=2; Caenorhabditis|Rep: TM2
domain-containing protein C41D11.9 precursor -
Caenorhabditis elegans
Length = 195
Score = 44.8 bits (101), Expect = 8e-04
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2
Query: 269 QCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 424
+C A + C G R+F + PC SG+ +T T+I S++LG G DRF LG
Sbjct: 105 KCSAHSSVICMGQRNFYKR-IPCNWSSGYSWTKTMILSVVLGGFGADRFYLG 155
>UniRef50_UPI00005847F7 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to conserved
hypothetical protein - Strongylocentrotus purpuratus
Length = 195
Score = 42.3 bits (95), Expect = 0.005
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +2
Query: 128 CSYLPLEFLDCDEP-IDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYG 304
CS L L C +P ID T + A G C G V D + C DGI G
Sbjct: 40 CSELLLGQYQCSDPDIDP----TTQAAIG--CTD-GSVNVDCYPAPDITC---DGITYNG 89
Query: 305 SRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQTGHG 439
+ + PC G+ + TTL+ SI LG G+DR LG G
Sbjct: 90 TTPGYQKQVPCRNTKGYSYRTTLLLSIFLGMFGVDRMYLGYPALG 134
>UniRef50_A2DYP8 Cluster: TM2 domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: TM2 domain containing
protein - Trichomonas vaginalis G3
Length = 155
Score = 42.3 bits (95), Expect = 0.005
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2
Query: 272 CKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQTGHG 439
C D +EC G+R+F R + C G ++ ++ S L G G DRF LG T G
Sbjct: 49 CTVYDTVECTGNRTFSRYQW-CPNRKGKSYSLAVVLSCLGGLFGFDRFYLGYTSLG 103
>UniRef50_UPI00015B6370 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 452
Score = 41.5 bits (93), Expect = 0.008
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = +2
Query: 272 CKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQTGHG 439
C I C G R F ++ PC G+ ++T LI SI LG G DRF LG G
Sbjct: 363 CTVKSDILCLGRRKFLKN-LPCNWTGGYKWSTALILSITLGGFGADRFYLGHWQEG 417
>UniRef50_A7RXA9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 144
Score = 41.1 bits (92), Expect = 0.010
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 263 KVQCKALDGIECYG----SRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQT 430
+V C + G+ C S F R PC +GH + L+ SI LG G+DRF LG
Sbjct: 26 EVMCHTVPGLTCESTETNSTEFKRK-VPCRHTNGHSYENALLLSIFLGMFGIDRFYLGYP 84
Query: 431 GHG 439
G
Sbjct: 85 AIG 87
>UniRef50_A2EP10 Cluster: TM2 domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: TM2 domain containing
protein - Trichomonas vaginalis G3
Length = 184
Score = 41.1 bits (92), Expect = 0.010
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = +2
Query: 116 PLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFG--GVRYDQVEKAKVQCKALDG 289
P + C+ LP E+ C K N A K G G D + C+ +G
Sbjct: 38 PGIPCNRLPSEYRYCTIQGLDKFNSYFGYADDESLPKNGCNGEFQDINRFGQAICQPAEG 97
Query: 290 IECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 424
IEC G + + C + T L+ SI G G+DRF LG
Sbjct: 98 IECLGDKYWIVQDARCFVDGEKSYITLLLCSIFFGIFGVDRFLLG 142
>UniRef50_Q95PJ8 Cluster: TM2 domain-containing protein Y66D12A.21
precursor; n=2; Caenorhabditis|Rep: TM2
domain-containing protein Y66D12A.21 precursor -
Caenorhabditis elegans
Length = 329
Score = 39.5 bits (88), Expect = 0.032
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 263 KVQCKALDGIECYGSRSFP---RDGFPCVRYSGHY-FTTTLIYSILLGFLGMDRFCLG 424
+V C+ + I+C G F R Y H +TTT++ SI LGF G+DR LG
Sbjct: 54 QVMCETAEHIKCVGKDQFGIFNRTVPSACHYGAHVSYTTTVLLSIFLGFFGIDRIYLG 111
>UniRef50_A4AFV7 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 383
Score = 37.5 bits (83), Expect = 0.13
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 317 PRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQTGHG 439
P P G F T + S+LLGFL +DRF LG+ G G
Sbjct: 64 PAAAAPIPAVQGKSFIVTWLLSLLLGFLAVDRFYLGKVGTG 104
>UniRef50_Q5DFA0 Cluster: SJCHGC08970 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08970 protein - Schistosoma
japonicum (Blood fluke)
Length = 274
Score = 37.1 bits (82), Expect = 0.17
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 263 KVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 424
+ +C+ + C G R F R PC +G + T++ S+ G G+DRF LG
Sbjct: 182 ETKCEPFPHVLCLGRRVFRRM-VPCEWSTGKSYALTVVLSLFFGGFGVDRFYLG 234
>UniRef50_A1R8B7 Cluster: Putative TM2 domain family protein; n=1;
Arthrobacter aurescens TC1|Rep: Putative TM2 domain
family protein - Arthrobacter aurescens (strain TC1)
Length = 315
Score = 33.5 bits (73), Expect = 2.1
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 359 FTTTLIYSILLGFLGMDRFCLGQTGHG 439
F TT I ++LLG G+DRF LG+ G G
Sbjct: 60 FMTTWILALLLGSFGVDRFYLGKIGTG 86
>UniRef50_Q2B6X8 Cluster: Methyl-accepting chemotaxis protein; n=1;
Bacillus sp. NRRL B-14911|Rep: Methyl-accepting
chemotaxis protein - Bacillus sp. NRRL B-14911
Length = 565
Score = 32.3 bits (70), Expect = 4.8
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = -3
Query: 397 ES*QDAINQGGRKVMSRVSHTRETVTRKASTAITFNSIQGFALNFSFLNLIISDTSKFDA 218
ES +D +NQ ++ + ++ RE T + T FNSIQ NF L I D S D
Sbjct: 77 ESFRDMMNQANERINASIAKGRELATLQ-ETQDRFNSIQEANKNFKELANQIMDDSSIDK 135
Query: 217 TMA 209
A
Sbjct: 136 EKA 138
>UniRef50_UPI000050FE16 Cluster: COG5651: PPE-repeat proteins; n=1;
Brevibacterium linens BL2|Rep: COG5651: PPE-repeat
proteins - Brevibacterium linens BL2
Length = 337
Score = 31.9 bits (69), Expect = 6.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 359 FTTTLIYSILLGFLGMDRFCLGQTGHG 439
F T +++ LGF G+DRF LG+ G G
Sbjct: 19 FLLTWLFAWFLGFFGVDRFYLGKVGTG 45
>UniRef50_Q5QCQ1 Cluster: FliL; n=2; Betaproteobacteria|Rep: FliL -
Herminiimonas arsenicoxydans
Length = 166
Score = 31.9 bits (69), Expect = 6.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 2 IMALITKSTAVTVLFITGIIKAKSESDPISKEPYRPLGPLVKCS 133
I+ L++ A +L + G K E I K+P+ P GP VK S
Sbjct: 113 ILLLLSSKKASEILSVEGKTKLAEEIINIFKQPFTPQGPTVKVS 156
>UniRef50_A3PTH5 Cluster: Conserved hypothetical proline and
threonine rich protein; n=5; Mycobacterium|Rep:
Conserved hypothetical proline and threonine rich
protein - Mycobacterium sp. (strain JLS)
Length = 594
Score = 31.9 bits (69), Expect = 6.4
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +2
Query: 95 EPYRPLGPLVKCSYLPLEFLDCDEPID-HKGNHTARQATGHGCV----KFGGVRY 244
EPY P GP + +++L DEP D +G H + A G V GGV Y
Sbjct: 393 EPYNPFGPAPTGARPEVQYLPADEPEDGRRGWHVPQLAFGAAAVVAAIAVGGVAY 447
>UniRef50_UPI000050FA70 Cluster: hypothetical protein BlinB01000941;
n=1; Brevibacterium linens BL2|Rep: hypothetical protein
BlinB01000941 - Brevibacterium linens BL2
Length = 146
Score = 31.5 bits (68), Expect = 8.5
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 278 ALDGIECYGSRSFPRD--GFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQ 427
+LD +E S + P G R + +F T L+ S+LLGFLG DRF G+
Sbjct: 21 SLDSLERPDSAALPDSVHGAERNRANRSFFVTWLL-SLLLGFLGADRFYTGR 71
>UniRef50_A2DYC3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1140
Score = 31.5 bits (68), Expect = 8.5
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +2
Query: 14 ITKSTAVTVLFITGIIKAKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKG 184
+T+ + +LFI G K K++ P+ + +PL L CS L L F+D D ID+KG
Sbjct: 936 LTEVSLEHLLFICGN-KIKNDQLPMVFDICQPLFKLQHCSTLLLHFIDRD--IDYKG 989
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,408,203
Number of Sequences: 1657284
Number of extensions: 8498508
Number of successful extensions: 19681
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19673
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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