Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F12f
         (444 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119007-1|AAM50867.1|  172|Drosophila melanogaster LP03404p pro...   168   3e-42
AE014298-1963|AAF48318.2|  172|Drosophila melanogaster CG11103-P...   168   3e-42
AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p pro...    50   2e-06
AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-P...    50   2e-06
AY052056-1|AAK93480.1| 1218|Drosophila melanogaster LP08452p pro...    27   8.7  
AE014296-1730|AAN11956.2| 1218|Drosophila melanogaster CG32046-P...    27   8.7  
AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-P...    27   8.7  

>AY119007-1|AAM50867.1|  172|Drosophila melanogaster LP03404p
           protein.
          Length = 172

 Score =  168 bits (409), Expect = 3e-42
 Identities = 74/123 (60%), Positives = 89/123 (72%)
 Frame = +2

Query: 65  AKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRY 244
           A S S       + PLGP V CS+LP +FLDC +P+DH+ N TA+Q   +GC+KFGG  Y
Sbjct: 10  ASSASGGAGNSAFYPLGPNVMCSFLPRDFLDCKDPVDHRENATAQQEKKYGCLKFGGSTY 69

Query: 245 DQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 424
           ++VE A V C     IECYG+R+F R G PCVRY+ HYF TTLIYS+LLGFLGMDRFCLG
Sbjct: 70  EEVEHAMVWCTVFADIECYGNRTFLRAGVPCVRYTDHYFVTTLIYSMLLGFLGMDRFCLG 129

Query: 425 QTG 433
           QTG
Sbjct: 130 QTG 132


>AE014298-1963|AAF48318.2|  172|Drosophila melanogaster CG11103-PB
           protein.
          Length = 172

 Score =  168 bits (409), Expect = 3e-42
 Identities = 74/123 (60%), Positives = 89/123 (72%)
 Frame = +2

Query: 65  AKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRY 244
           A S S       + PLGP V CS+LP +FLDC +P+DH+ N TA+Q   +GC+KFGG  Y
Sbjct: 10  ASSASGGAGNSAFYPLGPNVMCSFLPRDFLDCKDPVDHRENATAQQEKKYGCLKFGGSTY 69

Query: 245 DQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 424
           ++VE A V C     IECYG+R+F R G PCVRY+ HYF TTLIYS+LLGFLGMDRFCLG
Sbjct: 70  EEVEHAMVWCTVFADIECYGNRTFLRAGVPCVRYTDHYFVTTLIYSMLLGFLGMDRFCLG 129

Query: 425 QTG 433
           QTG
Sbjct: 130 QTG 132


>AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p
           protein.
          Length = 178

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
 Frame = +2

Query: 257 KAKVQCKALDGIECY--GSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQT 430
           +A+V C A + I C   G+ +F R+  PC   +G++  TTL+ S+ LG  G+DRF LG  
Sbjct: 57  RARVWCIAANEINCTETGNATFTRE-VPCKWTNGYHLDTTLLLSVFLGMFGVDRFYLGYP 115

Query: 431 GHG 439
           G G
Sbjct: 116 GIG 118


>AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-PA
           protein.
          Length = 178

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
 Frame = +2

Query: 257 KAKVQCKALDGIECY--GSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQT 430
           +A+V C A + I C   G+ +F R+  PC   +G++  TTL+ S+ LG  G+DRF LG  
Sbjct: 57  RARVWCIAANEINCTETGNATFTRE-VPCKWTNGYHLDTTLLLSVFLGMFGVDRFYLGYP 115

Query: 431 GHG 439
           G G
Sbjct: 116 GIG 118


>AY052056-1|AAK93480.1| 1218|Drosophila melanogaster LP08452p protein.
          Length = 1218

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 164  EPIDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGS 307
            + IDH  + T R  +G    K GG   D ++ A+ + + L  +E  GS
Sbjct: 882  DSIDHMASSTGRSRSGSDLHKIGGQDIDPMQ-AETEAELLSELERRGS 928


>AE014296-1730|AAN11956.2| 1218|Drosophila melanogaster CG32046-PB,
            isoform B protein.
          Length = 1218

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 164  EPIDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGS 307
            + IDH  + T R  +G    K GG   D ++ A+ + + L  +E  GS
Sbjct: 882  DSIDHMASSTGRSRSGSDLHKIGGQDIDPMQ-AETEAELLSELERRGS 928


>AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-PA,
            isoform A protein.
          Length = 1392

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 164  EPIDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGS 307
            + IDH  + T R  +G    K GG   D ++ A+ + + L  +E  GS
Sbjct: 882  DSIDHMASSTGRSRSGSDLHKIGGQDIDPMQ-AETEAELLSELERRGS 928


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,365,321
Number of Sequences: 53049
Number of extensions: 399005
Number of successful extensions: 912
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)