Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.6  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   6.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   6.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.7  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 376 QPKNQRTVIGKRLKISNLKFINLNLNRTTSNLKYISR 486
           QP+  +   GKR + +      + L R   + KY+SR
Sbjct: 79  QPQRTKPTAGKRARTAYTSAQLVELEREFHHGKYLSR 115


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 376 QPKNQRTVIGKRLKISNLKFINLNLNRTTSNLKYISR 486
           QP+  +   GKR + +      + L R   + KY+SR
Sbjct: 70  QPQRTKPTAGKRARTAYTSAQLVELEREFHHGKYLSR 106


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 248 YSTASAVSTCRYLPTSA 298
           YS+ S +++C  +PT+A
Sbjct: 96  YSSRSVMTSCSSVPTTA 112


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 394 TVIGKRLKISNLKFINLNLNRTTSNL 471
           TVI    +I + KF+ + +  TT  +
Sbjct: 55  TVISASTRIKSFKFLTIGVGITTDTI 80


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +2

Query: 173 LPTTNRFAATSTPAKLSGS*QRSCRYSTASAVS 271
           +P+ +  A+++  A +  +  +SCRY+   A +
Sbjct: 28  VPSFSSTASSALAAAVDAATDKSCRYTAGLAAN 60


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +2

Query: 173 LPTTNRFAATSTPAKLSGS*QRSCRYSTASAVS 271
           +P+ +  A+++  A +  +  +SCRY+   A +
Sbjct: 87  VPSFSSTASSALAAAVDAATDKSCRYTAGLAAN 119


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +2

Query: 173 LPTTNRFAATSTPAKLSGS*QRSCRYSTASAVS 271
           +P+ +  A+++  A +  +  +SCRY+   A +
Sbjct: 28  VPSFSSTASSALAAAVDAATDKSCRYTAGLAAN 60


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +2

Query: 173 LPTTNRFAATSTPAKLSGS*QRSCRYSTASAVS 271
           +P+ +  A+++  A +  +  +SCRY+   A +
Sbjct: 87  VPSFSSTASSALAAAVDAATDKSCRYTAGLAAN 119


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 331 FNHSK*TSPLNSPRNQPKNQR 393
           +NH+  T P + P   PK+++
Sbjct: 101 YNHNPLTPPNSEPLVSPKSEK 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,989
Number of Sequences: 336
Number of extensions: 1187
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)