Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F10f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              33   0.80 
BC115363-1|AAI15364.1|  799|Homo sapiens ARHGAP12 protein protein.     30   5.7  
BC115362-1|AAI15363.1|  799|Homo sapiens ARHGAP12 protein protein.     30   5.7  
BC094719-1|AAH94719.1|  841|Homo sapiens ARHGAP12 protein protein.     30   5.7  
AY033595-1|AAK52312.1|  846|Homo sapiens rho-GAP domain containi...    30   5.7  
AY033594-1|AAK52311.1|  816|Homo sapiens rho-GAP domain containi...    30   5.7  
AL834250-1|CAD38926.2|  792|Homo sapiens hypothetical protein pr...    30   5.7  
AL390715-4|CAI12372.1|  846|Homo sapiens Rho GTPase activating p...    30   5.7  
AL390715-3|CAI12373.1|  794|Homo sapiens Rho GTPase activating p...    30   5.7  
AL390715-2|CAI12371.1|  816|Homo sapiens Rho GTPase activating p...    30   5.7  

>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = +2

Query: 107  TSPTKLSGSTTCSSVPTCLPN*LPTTNRFAATSTPAKLSGS*QRSCRYSTASAVSTCRYL 286
            T+ T L+ +T+ +S PT   N  PTT+  +A ST + +S     +    T+S  ST +  
Sbjct: 1126 TTSTTLAPTTSTTSAPTTSTNSAPTTSTISA-STTSTISAPTTSTISSPTSSTTSTPQTS 1184

Query: 287  PTSA 298
             TSA
Sbjct: 1185 KTSA 1188


>BC115363-1|AAI15364.1|  799|Homo sapiens ARHGAP12 protein protein.
          Length = 799

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 439 NLNLNRTTSNLKYISRLSSFSNPSTSI 519
           +L+L R+T N+  +  LSSF  PS+S+
Sbjct: 97  SLHLQRSTENVNKLPELSSFGKPSSSV 123


>BC115362-1|AAI15363.1|  799|Homo sapiens ARHGAP12 protein protein.
          Length = 799

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 439 NLNLNRTTSNLKYISRLSSFSNPSTSI 519
           +L+L R+T N+  +  LSSF  PS+S+
Sbjct: 97  SLHLQRSTENVNKLPELSSFGKPSSSV 123


>BC094719-1|AAH94719.1|  841|Homo sapiens ARHGAP12 protein protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 439 NLNLNRTTSNLKYISRLSSFSNPSTSI 519
           +L+L R+T N+  +  LSSF  PS+S+
Sbjct: 97  SLHLQRSTENVNKLPELSSFGKPSSSV 123


>AY033595-1|AAK52312.1|  846|Homo sapiens rho-GAP domain containing
           protein ARHGAP12b protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 439 NLNLNRTTSNLKYISRLSSFSNPSTSI 519
           +L+L R+T N+  +  LSSF  PS+S+
Sbjct: 97  SLHLQRSTENVNKLPELSSFGKPSSSV 123


>AY033594-1|AAK52311.1|  816|Homo sapiens rho-GAP domain containing
           protein ARHGAP12a protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 439 NLNLNRTTSNLKYISRLSSFSNPSTSI 519
           +L+L R+T N+  +  LSSF  PS+S+
Sbjct: 97  SLHLQRSTENVNKLPELSSFGKPSSSV 123


>AL834250-1|CAD38926.2|  792|Homo sapiens hypothetical protein
           protein.
          Length = 792

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 439 NLNLNRTTSNLKYISRLSSFSNPSTSI 519
           +L+L R+T N+  +  LSSF  PS+S+
Sbjct: 95  SLHLQRSTENVNKLPELSSFGKPSSSV 121


>AL390715-4|CAI12372.1|  846|Homo sapiens Rho GTPase activating
           protein 12 protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 439 NLNLNRTTSNLKYISRLSSFSNPSTSI 519
           +L+L R+T N+  +  LSSF  PS+S+
Sbjct: 97  SLHLQRSTENVNKLPELSSFGKPSSSV 123


>AL390715-3|CAI12373.1|  794|Homo sapiens Rho GTPase activating
           protein 12 protein.
          Length = 794

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 439 NLNLNRTTSNLKYISRLSSFSNPSTSI 519
           +L+L R+T N+  +  LSSF  PS+S+
Sbjct: 97  SLHLQRSTENVNKLPELSSFGKPSSSV 123


>AL390715-2|CAI12371.1|  816|Homo sapiens Rho GTPase activating
           protein 12 protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 439 NLNLNRTTSNLKYISRLSSFSNPSTSI 519
           +L+L R+T N+  +  LSSF  PS+S+
Sbjct: 97  SLHLQRSTENVNKLPELSSFGKPSSSV 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,443,689
Number of Sequences: 237096
Number of extensions: 735519
Number of successful extensions: 5110
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5099
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)