Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F09f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    27   0.10 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    27   0.10 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.6  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 27.1 bits (57), Expect = 0.10
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -3

Query: 420 FGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVNVFNQCINVFAQ 277
           FGQD N DGV+N    + +        T +  F  +NVF+  + VF Q
Sbjct: 434 FGQDLNQDGVMNINGVLFVFLT---NMTFQNVFAVINVFSGELPVFLQ 478


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 27.1 bits (57), Expect = 0.10
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -3

Query: 420 FGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVNVFNQCINVFAQ 277
           FGQD N DGV+N    + +        T +  F  +NVF+  + VF Q
Sbjct: 434 FGQDLNQDGVMNINGVLFVFLT---NMTFQNVFAVINVFSGELPVFLQ 478


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 203 SVSHSFHXHQYYF 165
           ++SH FH H Y F
Sbjct: 592 NLSHPFHLHGYAF 604


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 203 SVSHSFHXHQYYF 165
           ++SH FH H Y F
Sbjct: 592 NLSHPFHLHGYAF 604


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 13  FILIVKKYIYFFY*ITFSNLYFEYTKNPLMKMLLY 117
           F++IV    +F   +    LYF    NP++  + +
Sbjct: 535 FVVIVITIFFFTANVQAGELYFMSLLNPILSNVTF 569


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 13  FILIVKKYIYFFY*ITFSNLYFEYTKNPLMKMLLY 117
           F++IV    +F   +    LYF    NP++  + +
Sbjct: 260 FVVIVITIFFFTANVQAGELYFMSLLNPILSNVTF 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,797
Number of Sequences: 336
Number of extensions: 2721
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)