BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302F09f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein. 103 5e-24
EF492429-1|ABP35929.1| 155|Anopheles gambiae lysozyme i-2 protein. 69 1e-13
DQ974171-1|ABJ52811.1| 403|Anopheles gambiae serpin 14 protein. 23 4.7
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 6.2
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 8.2
>AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein.
Length = 167
Score = 103 bits (246), Expect = 5e-24
Identities = 39/73 (53%), Positives = 55/73 (75%)
Frame = -3
Query: 510 GLSPDAPDAYSSCTVDPYCAAQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGE 331
G SPD+ +AY++C +PYCAA+TVQ YMR+FGQDCNGDG ++C+D+ +HK GGY C
Sbjct: 83 GDSPDSQNAYANCANEPYCAARTVQGYMRKFGQDCNGDGRIDCFDHAIVHKLGGYNCKNA 142
Query: 330 LPFNYVNVFNQCI 292
+P Y + ++CI
Sbjct: 143 VPIVYQSKIDECI 155
>EF492429-1|ABP35929.1| 155|Anopheles gambiae lysozyme i-2 protein.
Length = 155
Score = 68.5 bits (160), Expect = 1e-13
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = -3
Query: 486 AYSSCTVDPYCAAQTVQNYMRRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVNV 307
A+ C D CA V YM ++G DCNGDG+V+C DY +H GG C G L + +
Sbjct: 79 AFEDCANDYDCATGIVTQYMEKYGTDCNGDGLVDCVDYTMLHVNGGPRCQGALGGTFASR 138
Query: 306 FNQCI 292
F QC+
Sbjct: 139 FYQCL 143
>DQ974171-1|ABJ52811.1| 403|Anopheles gambiae serpin 14 protein.
Length = 403
Score = 23.4 bits (48), Expect = 4.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 413 RTATATEWSTAMTTWRSTRREATGAPANF 327
+ + A +S A T R RE G PANF
Sbjct: 59 QNSIAMLYSIATGTTRDRLREVFGLPANF 87
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.0 bits (47), Expect = 6.2
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -3
Query: 492 PDAYSSCTVDPYCAAQTVQNYMRRFGQDCNGDGVVN 385
P TV + A +Q+Y RRF + D +N
Sbjct: 1557 PGVDDEVTVGKFYATFLIQDYFRRFKKRKENDSKLN 1592
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 22.6 bits (46), Expect = 8.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 100 SKDSSCIRNTNWK 62
SK SS RNTNW+
Sbjct: 2639 SKKSSVRRNTNWE 2651
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,073
Number of Sequences: 2352
Number of extensions: 10572
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -