Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F07f
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p pro...   161   2e-40
AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-P...   161   2e-40
BT022715-1|AAY55131.1|  711|Drosophila melanogaster RE67551p pro...    28   4.0  
AF023478-1|AAB87873.1|  850|Drosophila melanogaster GTPase activ...    28   4.0  
AE014134-1295|AAF52526.1|  850|Drosophila melanogaster CG33529-P...    28   4.0  
AE014134-1294|AAX52662.1|  876|Drosophila melanogaster CG33529-P...    28   4.0  
AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p pro...    28   5.3  
AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA...    28   5.3  

>AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p
           protein.
          Length = 84

 Score =  161 bits (392), Expect = 2e-40
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +2

Query: 17  LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 196
           LA DLLHP PA E+RKHKLKRLV HPNSYFMDVKCPGCY+ITTVFSHAQ VVVCAGC+TI
Sbjct: 3   LAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCATI 62

Query: 197 LCQPTGGRARLTEGCSFRRK 256
           LCQPTGGRA+LTEGCSFRRK
Sbjct: 63  LCQPTGGRAKLTEGCSFRRK 82


>AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-PA
           protein.
          Length = 84

 Score =  161 bits (392), Expect = 2e-40
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +2

Query: 17  LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 196
           LA DLLHP PA E+RKHKLKRLV HPNSYFMDVKCPGCY+ITTVFSHAQ VVVCAGC+TI
Sbjct: 3   LAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCATI 62

Query: 197 LCQPTGGRARLTEGCSFRRK 256
           LCQPTGGRA+LTEGCSFRRK
Sbjct: 63  LCQPTGGRAKLTEGCSFRRK 82


>BT022715-1|AAY55131.1|  711|Drosophila melanogaster RE67551p
           protein.
          Length = 711

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 8   HEALAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVF 151
           HE L +  L P P+  +  H L   +     +FM + CP   ++ +V+
Sbjct: 140 HELLPVSCLLPQPSPAKMAHTLNENI--TVEHFMPILCPKASQLISVY 185


>AF023478-1|AAB87873.1|  850|Drosophila melanogaster GTPase
           activating protein for Rap1 protein.
          Length = 850

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 8   HEALAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVF 151
           HE L +  L P P+  +  H L   +     +FM + CP   ++ +V+
Sbjct: 279 HELLPVSCLLPQPSPAKMAHTLNENI--TVDHFMPILCPKASQLISVY 324


>AE014134-1295|AAF52526.1|  850|Drosophila melanogaster CG33529-PA,
           isoform A protein.
          Length = 850

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 8   HEALAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVF 151
           HE L +  L P P+  +  H L   +     +FM + CP   ++ +V+
Sbjct: 279 HELLPVSCLLPQPSPAKMAHTLNENI--TVEHFMPILCPKASQLISVY 324


>AE014134-1294|AAX52662.1|  876|Drosophila melanogaster CG33529-PB,
           isoform B protein.
          Length = 876

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 8   HEALAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVF 151
           HE L +  L P P+  +  H L   +     +FM + CP   ++ +V+
Sbjct: 305 HELLPVSCLLPQPSPAKMAHTLNENI--TVEHFMPILCPKASQLISVY 350


>AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p
           protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 289 YLILRFFFQLYNGVIFFKFTTMDPSERY 372
           Y++  F + LYN + F    T DP+  Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


>AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA
           protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 289 YLILRFFFQLYNGVIFFKFTTMDPSERY 372
           Y++  F + LYN + F    T DP+  Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,409,158
Number of Sequences: 53049
Number of extensions: 324568
Number of successful extensions: 752
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)