Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302F06f
(517 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P07254 Cluster: Chitinase A precursor; n=36; root|Rep: ... 170 1e-41
UniRef50_UPI00015C55BD Cluster: hypothetical protein CKO_02217; ... 150 2e-35
UniRef50_P41684 Cluster: Probable endochitinase precursor; n=35;... 136 4e-31
UniRef50_O10363 Cluster: Probable endochitinase precursor; n=42;... 132 6e-30
UniRef50_P32823 Cluster: Chitinase A precursor; n=85; Bacteria|R... 102 4e-21
UniRef50_Q7MGC4 Cluster: Chitinase; n=2; Vibrio|Rep: Chitinase -... 100 2e-20
UniRef50_A6FBZ7 Cluster: Exochitinase; n=1; Moritella sp. PE36|R... 97 2e-19
UniRef50_Q9RQJ3 Cluster: Chitinase; n=3; root|Rep: Chitinase - A... 70 4e-11
UniRef50_Q4S8U5 Cluster: Chromosome 7 SCAF14703, whole genome sh... 40 0.025
UniRef50_UPI0000D8E943 Cluster: Down syndrome cell adhesion mole... 38 0.10
UniRef50_A5E1H8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.24
UniRef50_Q54J96 Cluster: Putative uncharacterized protein; n=1; ... 36 0.55
UniRef50_Q8TD84 Cluster: Down syndrome cell adhesion molecule-li... 36 0.72
UniRef50_A5VDE1 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_A5I5R8 Cluster: Chitinase precursor; n=4; Clostridium b... 35 1.3
UniRef50_A7M0F3 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_A7M4F2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q5CR59 Cluster: RRp1-like protein; n=2; Cryptosporidium... 34 2.2
UniRef50_Q8RIM5 Cluster: Putative uncharacterized protein FN1550... 33 2.9
UniRef50_Q8A3C9 Cluster: Putative outer membrane protein, probab... 33 2.9
UniRef50_Q5TWP4 Cluster: ENSANGP00000027465; n=1; Anopheles gamb... 33 2.9
UniRef50_A7S7K1 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.9
UniRef50_A5E068 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_P26676 Cluster: Large structural protein (Protein L) (T... 32 6.8
>UniRef50_P07254 Cluster: Chitinase A precursor; n=36; root|Rep:
Chitinase A precursor - Serratia marcescens
Length = 563
Score = 170 bits (414), Expect = 1e-41
Identities = 79/123 (64%), Positives = 95/123 (77%), Gaps = 2/123 (1%)
Frame = +3
Query: 123 PGKPNLGWGERTFAIVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDKKE 302
PGKP + WG FAIVEV+QAATAYN LV K+AADVSV+WN+W GDA +++LL+ KE
Sbjct: 26 PGKPTIAWGNTKFAIVEVDQAATAYNNLVKVKNAADVSVSWNLWNGDAGTTAKILLNGKE 85
Query: 303 VWSG--AGSATSAAFKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 476
WSG GS+ +A FKV KGGRYQMQV LCN+DGC++S+ EIVVADTDGSHL PL +
Sbjct: 86 AWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLAPLKEPL 145
Query: 477 GEK 485
EK
Sbjct: 146 LEK 148
>UniRef50_UPI00015C55BD Cluster: hypothetical protein CKO_02217;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_02217 - Citrobacter koseri ATCC BAA-895
Length = 902
Score = 150 bits (364), Expect = 2e-35
Identities = 75/122 (61%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
Frame = +3
Query: 123 PGKPNLGWGERTFAIVEVNQAATAYNQLV-TKKDAADVSVNWNVWTGDAADKSRVLLDKK 299
PG P++ G FAIVEV+QAA YN LV D DV V WNVW+GDA ++VLLD K
Sbjct: 25 PGTPSITSGNDKFAIVEVDQAAQDYNNLVKVHNDGVDVKVEWNVWSGDAPTSAKVLLDGK 84
Query: 300 EVWSGAGSAT-SAAFKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 476
VWSGAGSA SA FKVKKGGRYQ QVELCN+ GC+ S I+VADTDGSHL PL+ ++
Sbjct: 85 TVWSGAGSAAGSATFKVKKGGRYQEQVELCNTSGCTKSASKLIIVADTDGSHLLPLNTTM 144
Query: 477 GE 482
E
Sbjct: 145 KE 146
>UniRef50_P41684 Cluster: Probable endochitinase precursor; n=35;
root|Rep: Probable endochitinase precursor - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 551
Score = 136 bits (328), Expect = 4e-31
Identities = 57/117 (48%), Positives = 78/117 (66%)
Frame = +3
Query: 123 PGKPNLGWGERTFAIVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDKKE 302
PG P + W +R +A+VE+N ATAY L+ K+ DV V+WNVW GD D + VL D+++
Sbjct: 19 PGTPVIDWADRNYALVEINYEATAYENLIKPKEQVDVQVSWNVWNGDIGDIAYVLFDEQQ 78
Query: 303 VWSGAGSATSAAFKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYS 473
VW G + A KV G++ M+V+LCN DGCS S+ V + VADTDG HL PL+Y+
Sbjct: 79 VWKGDAESKRATIKVLVSGQFNMRVKLCNEDGCSVSDPVLVKVADTDGGHLAPLEYT 135
>UniRef50_O10363 Cluster: Probable endochitinase precursor; n=42;
root|Rep: Probable endochitinase precursor - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 550
Score = 132 bits (318), Expect = 6e-30
Identities = 58/120 (48%), Positives = 77/120 (64%)
Frame = +3
Query: 123 PGKPNLGWGERTFAIVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDKKE 302
PG P + W +R +A+V VN ATAY LV +K V V+WNVW G D + VL ++ +
Sbjct: 18 PGTPVIDWADRNYALVSVNSEATAYENLVERKAGVSVPVSWNVWNGGVGDMAYVLFNENQ 77
Query: 303 VWSGAGSATSAAFKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGE 482
VW GA +A A V K G++ M+V+LC+ DG S SE V + VADTDG HL PL+Y+ GE
Sbjct: 78 VWKGAAAAKRATIDVSKSGQFNMRVKLCDDDGFSVSEPVTVRVADTDGGHLSPLEYAWGE 137
>UniRef50_P32823 Cluster: Chitinase A precursor; n=85; Bacteria|Rep:
Chitinase A precursor - Alteromonas sp. (strain O-7)
Length = 820
Score = 102 bits (245), Expect = 4e-21
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Frame = +3
Query: 108 GSCGPPGKPNLGWGERTFAIVEVN-QAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRV 284
G+ P P L W + ++ VEVN +Y QLV KD D+S+ WN W+G D +V
Sbjct: 18 GALAAPSTPTLDWQPQQYSFVEVNVDGLGSYKQLVKAKDVVDISIKWNAWSGSGGDNYKV 77
Query: 285 LLDKKEVWSG---AGSATSAA-FKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSH 452
D V G AG+ + F K GR+Q+ +ELC C+ S G EIV+ADTDG+H
Sbjct: 78 YFDDLLVNQGSLPAGTKSGVVQFPYTKSGRHQLYLELCEGTVCARSAGKEIVIADTDGAH 137
Query: 453 LRPLDYSI 476
L PL ++
Sbjct: 138 LAPLPMNV 145
>UniRef50_Q7MGC4 Cluster: Chitinase; n=2; Vibrio|Rep: Chitinase -
Vibrio vulnificus (strain YJ016)
Length = 282
Score = 100 bits (239), Expect = 2e-20
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Frame = +3
Query: 159 FAIVEVNQAATA-YNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDKKEVWSG--AGSAT 329
F+ +E+ TA YNQ+V D A +SV +N W+G+ D + D +V SG +GS T
Sbjct: 62 FSKIELAMETTAGYNQMVKYHDQATISVKFNQWSGNTGDTYNIYFDGVKVASGPISGSQT 121
Query: 330 SAAFKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 476
+A F+ KGG YQM++E C++ GC+ S EI +ADTDGSHL+PL ++
Sbjct: 122 AATFQYGKGGLYQMEIEACDATGCAKSAPAEITIADTDGSHLKPLTMNV 170
>UniRef50_A6FBZ7 Cluster: Exochitinase; n=1; Moritella sp. PE36|Rep:
Exochitinase - Moritella sp. PE36
Length = 799
Score = 97.1 bits (231), Expect = 2e-19
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +3
Query: 123 PGKPNLGWGERT-FAIVEVN-QAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDK 296
P P++ W + + + +N A +Y + T+ D +V V+WNVW+GD A K V ++
Sbjct: 27 PQAPSIAWADYSKLGFITINTDAVVSYKDMYTRVDVVEVPVSWNVWSGDKATKWEVEVNG 86
Query: 297 KEVWSGAGSATSAAFKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLR 458
+ + SG+G+ S +GG M V LCN+DGCS S E++++DTDGSHL+
Sbjct: 87 EIMMSGSGTGKSTVLSFTEGGLKDMVVRLCNADGCSESATTELLISDTDGSHLK 140
>UniRef50_Q9RQJ3 Cluster: Chitinase; n=3; root|Rep: Chitinase -
Aeromonas hydrophila
Length = 862
Score = 69.7 bits (163), Expect = 4e-11
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 123 PGKPNLGWGERTFAIVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSR 281
PGKP +GWGE FAI+ V+QAAT+YN+LVT VSV WN+W+ D ++
Sbjct: 26 PGKPTIGWGETKFAIIHVDQAATSYNKLVTVHKTRPVSVTWNLWSRDVGHNAK 78
>UniRef50_Q4S8U5 Cluster: Chromosome 7 SCAF14703, whole genome shotgun
sequence; n=5; Tetraodontidae|Rep: Chromosome 7
SCAF14703, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2095
Score = 40.3 bits (90), Expect = 0.025
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Frame = +3
Query: 204 LVTKKDAADVSVNWNVWTGDAADKSRVLLD--KKEVW---SGAGSATSAAF--KVKKGGR 362
L+T ++ +N WT S ++LD K W S ++T+ F ++++
Sbjct: 1542 LLTHVNSTHAGLNLQGWTSGGCPISDLMLDFRPKGTWAWQSLKANSTTQLFLSELREATW 1601
Query: 363 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGE 482
Y+++++ CNS GC ++ + D DGS + P+ + GE
Sbjct: 1602 YELKMKACNSAGC-GNQSFQFATTDYDGSTIPPIKSARGE 1640
>UniRef50_UPI0000D8E943 Cluster: Down syndrome cell adhesion
molecule-like protein 1 precursor (Down syndrome cell
adhesion molecule 2).; n=1; Danio rerio|Rep: Down
syndrome cell adhesion molecule-like protein 1 precursor
(Down syndrome cell adhesion molecule 2). - Danio rerio
Length = 1862
Score = 38.3 bits (85), Expect = 0.10
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = +3
Query: 204 LVTKKDAADVSVNWNVWTGDAADKSRVLLD--KKEVWSGAGSATSAAFKV-----KKGGR 362
L T ++ +N WT + VLL+ K W+ T+A+ + ++
Sbjct: 1323 LFTHINSTHARMNLQGWTSGGCPITAVLLEFRPKGTWAWQSVRTNASADIFLAELREATW 1382
Query: 363 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGE 482
Y+++++ CNS GC ++ + D DGS + P+ + GE
Sbjct: 1383 YELKMKACNSAGC-GNQSSQFATLDYDGSTIPPIKSARGE 1421
>UniRef50_A5E1H8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 728
Score = 37.1 bits (82), Expect = 0.24
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 156 TFAIVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDKKEVWSGA 317
TF+ +N+ + ++L + D S+NWNVW K R+ + E++ GA
Sbjct: 421 TFSESTINEFSKKLSELTANLEVDDESINWNVWKRFHQIKERIFNFRDEIFDGA 474
>UniRef50_Q54J96 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1476
Score = 35.9 bits (79), Expect = 0.55
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = -1
Query: 424 ISTPSLELHPSELQSSTCIWYLPPFFTLKAADVALPAPLQTSFLSSRTLDLSAASPVHTF 245
++ P+ +L PS+ SST + +P T +++ PAP+ T+ +++ T + SP T
Sbjct: 877 LTNPASKLTPSKSLSSTNVNSVPTSSTSQSSSTTAPAPITTTTMTTATNTSPSLSPPTTA 936
Query: 244 QLTETSA 224
T T++
Sbjct: 937 NSTSTTS 943
>UniRef50_Q8TD84 Cluster: Down syndrome cell adhesion molecule-like
protein 1 precursor; n=63; Euteleostomi|Rep: Down
syndrome cell adhesion molecule-like protein 1 precursor
- Homo sapiens (Human)
Length = 2053
Score = 35.5 bits (78), Expect = 0.72
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = +3
Query: 204 LVTKKDAADVSVNWNVWTGDAADKSRVLLD--KKEVWSGAGSATSAAFKV-----KKGGR 362
L T ++ +N W + ++L+ K W+ G +++ +V ++
Sbjct: 1487 LFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFLTELREATW 1546
Query: 363 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGE 482
Y++++ CNS GC +E + D DGS + P+ + GE
Sbjct: 1547 YELRMRACNSAGC-GNETAQFATLDYDGSTIPPIKSAQGE 1585
>UniRef50_A5VDE1 Cluster: Putative uncharacterized protein; n=1;
Sphingomonas wittichii RW1|Rep: Putative uncharacterized
protein - Sphingomonas wittichii RW1
Length = 396
Score = 34.7 bits (76), Expect = 1.3
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 123 PGKPNLGWGERTFAIVEVNQAATAYNQLVT-KKDAADVSVNWNVWTGDAAD 272
PG +GWGE + A+ + AA L T D A +S+ WN + A D
Sbjct: 228 PGARGVGWGEESRALAPIFAAAGCDAALATPPADPASLSIAWNAFACSALD 278
>UniRef50_A5I5R8 Cluster: Chitinase precursor; n=4; Clostridium
botulinum|Rep: Chitinase precursor - Clostridium
botulinum A str. ATCC 3502
Length = 739
Score = 34.7 bits (76), Expect = 1.3
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Frame = +3
Query: 228 DVSVNWNVWTGDAADKSR-----VLLDKKEVWSGAGSATSAAFKV--KKGGRYQMQVELC 386
D +V N+W G ADK + VL+ + ++ + A + + K+ +K G+Y EL
Sbjct: 660 DYTVTMNMWWGVNADKVKIYENGVLISEADLTANTPQAQTHSVKINGRKNGKYTYYAELI 719
Query: 387 NSDGCSSSEGVEIVVADTD 443
N G + S+ + + V +++
Sbjct: 720 NGAGITRSDDLIVNVTESN 738
>UniRef50_A7M0F3 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 1459
Score = 34.3 bits (75), Expect = 1.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 261 DAADKSRVLLDKKEVWSGAGSATSAAFKVKKGGRYQMQVELCNSDG 398
DA + + L +E W+ AG+ SA + G YQ+Q+ NSDG
Sbjct: 814 DAIEYAYRLQGLEEEWNEAGNNRSATYINLPAGEYQLQIRSSNSDG 859
>UniRef50_A7M4F2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 1445
Score = 33.9 bits (74), Expect = 2.2
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +3
Query: 180 QAATAY-NQLVTKKDAADVSVNWNVWTG-DAADKSRVLLDKKEV-WSGAGSATSAAFKVK 350
Q A Y N+L K + ++++++ + D K L + WS S A ++
Sbjct: 767 QEAMPYINELNLKYYQSSLTISFSTFNYLDGVSKYSYSLPPYDTEWSSPSSLNFATYRNL 826
Query: 351 KGGRYQMQVELCNSDGCSSSEGV-EIVVA 434
G+Y++ V+ CN+ G E V EIV+A
Sbjct: 827 PPGKYELHVKACNAAGIWGEENVMEIVIA 855
>UniRef50_Q5CR59 Cluster: RRp1-like protein; n=2;
Cryptosporidium|Rep: RRp1-like protein - Cryptosporidium
parvum Iowa II
Length = 493
Score = 33.9 bits (74), Expect = 2.2
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = +3
Query: 198 NQLVTKKDAADVSVNWNVWTGDAADKSRVLL---DKKEVWSGAGSATSAAFKVKKGGRYQ 368
N+ K+ D+S N + D+ SR L+ DKK G+ F+ Q
Sbjct: 381 NEDKEKRVRFDMSKNVRMLLPDSISTSRALVKIFDKKSDMKGSNKINCILFRSSPNSDIQ 440
Query: 369 MQVELCNSDGC-----SSSEGVEIVVAD 437
ELC+SD C +S + +EI+ A+
Sbjct: 441 NDPELCSSDSCKNYNLNSLKNIEIISAE 468
>UniRef50_Q8RIM5 Cluster: Putative uncharacterized protein FN1550;
n=1; Fusobacterium nucleatum subsp. nucleatum|Rep:
Putative uncharacterized protein FN1550 - Fusobacterium
nucleatum subsp. nucleatum
Length = 247
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 150 ERTFAIVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKS 278
E+++ ++V + +LV K +VS+N VW GDA K+
Sbjct: 133 EKSYPTIKVGIGMSTAQELVVKAGRKNVSINSKVWIGDAVTKA 175
>UniRef50_Q8A3C9 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Bacteroides
thetaiotaomicron|Rep: Putative outer membrane protein,
probably involved in nutrient binding - Bacteroides
thetaiotaomicron
Length = 541
Score = 33.5 bits (73), Expect = 2.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 173 FDDRERALAPAEVRFPWRAAGADGERGHREYERYHPMP 60
FDD +R +P+E++ ++A G G +E Y+P+P
Sbjct: 487 FDDLKRWYSPSEIQLIFKANGKQGAENFQEKHLYYPIP 524
>UniRef50_Q5TWP4 Cluster: ENSANGP00000027465; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000027465 - Anopheles gambiae
str. PEST
Length = 1552
Score = 33.5 bits (73), Expect = 2.9
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +3
Query: 270 DKSRVLLDKKEVWSGAGSATSAAFKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGS 449
D+ + D K W +A F K GG ++ +SD EG+ ++ D+ GS
Sbjct: 1315 DRVKKSKDLKNAWKKFIGIATAKFNGKSGGDQDLEKTSDSSDILEKDEGISSLIDDSSGS 1374
Query: 450 HLRPLDYSIGEKITXQADFG 509
Y ++IT + D G
Sbjct: 1375 GAYGSHYQ-QQQITKEQDSG 1393
>UniRef50_A7S7K1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 750
Score = 33.1 bits (72), Expect = 3.9
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 117 GPPGKPNLGWGERTFAIVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDK 296
G P G E+ AI V+ A Q ++D A + W+++ + ADK R LL K
Sbjct: 554 GVPRDEGAGEREKRDAIKAVDSACDKIQQQRVRRDTARIGALWHIYHVEDADKIRDLLHK 613
>UniRef50_A5E068 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 601
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 394 SELQSSTCIWYLPPFFTLKAADVALP-APLQTSFLSSR 284
S+L+ T +WY+ T + ADV P APLQ+ F + R
Sbjct: 3 SQLKRDTEVWYILTCVTFRIADVHQPHAPLQSEFANPR 40
>UniRef50_P26676 Cluster: Large structural protein (Protein L)
(Transcriptase) (Replicase) [Includes: RNA-directed RNA
polymerase (EC 2.7.7.48); mRNA (guanine-
N(7)-)-methyltransferase (EC 2.1.1.56); mRNA
guanylyltransferase (EC 2.7.7.-)]; n=24; Rubulavirus|Rep:
Large structural protein (Protein L) (Transcriptase)
(Replicase) [Includes: RNA-directed RNA polymerase (EC
2.7.7.48); mRNA (guanine- N(7)-)-methyltransferase (EC
2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] - Human
parainfluenza 2 virus (strain Toshiba) (HPIV-2)
Length = 2262
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 234 SVNWNVWTGDAADKSRVLLDKKEVWSGAGSATSAAFK 344
SV + +W D AD S ++ D +W+G G+ T + K
Sbjct: 1859 SVPYKLWQADLADDSNLIKDFVPLWNGNGAVTDLSTK 1895
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,680,310
Number of Sequences: 1657284
Number of extensions: 7758522
Number of successful extensions: 28336
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 27291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28318
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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