Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F06f
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   1.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   5.7  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   5.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   10.0 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   10.0 

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 131 FPWRAAGADGERGHREYERYHPM 63
           +PW  +  + +RG + Y RY  +
Sbjct: 261 YPWMRSQFERKRGRQTYTRYQTL 283


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 15  GVSRLLVCFFVEPVMGHRMI 74
           GV   L+ +F+EP+  H ++
Sbjct: 446 GVQGALLSYFIEPIYFHSIV 465


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +2

Query: 443 W*PFEASRLFYW*ENNXSSRLREK 514
           W P+    L+YW + N + ++ ++
Sbjct: 273 WTPYYVMSLWYWIDRNSAYKIDQR 296


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 144 WGERTFAIV-EVNQAATAYNQLVTK 215
           WG++TF I+ + N   ++ N +  K
Sbjct: 70  WGDKTFVIIMKFNGVPSSLNVITNK 94


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 309 SGAGSATSAAFKVKKGGRYQMQVELC 386
           +G GS+     + KKG   + Q ELC
Sbjct: 162 NGYGSSDGCDARKKKGPTPRQQEELC 187


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 480 HQ*NNREASNGYHQC 436
           HQ +N+E S   H C
Sbjct: 54  HQDHNKEKSKNNHHC 68


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = -3

Query: 83  YERYHPMPHNWFYKKANK 30
           +ERY P+ + W  +   +
Sbjct: 77  WERYQPISYKWITRSGTR 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,660
Number of Sequences: 438
Number of extensions: 1812
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)