Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F05f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1213 + 24921603-24921746,24921923-24922786                      106   9e-24
06_01_0477 + 3404648-3404657,3405385-3405461,3405638-3406501          106   9e-24
01_06_1398 - 37027659-37028112,37028393-37028460,37028543-37028908     66   1e-11
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817           27   9.1  
01_05_0264 + 20168409-20168593,20168726-20169055,20170142-201706...    27   9.1  

>07_03_1213 + 24921603-24921746,24921923-24922786
          Length = 335

 Score =  106 bits (255), Expect = 9e-24
 Identities = 48/97 (49%), Positives = 66/97 (68%)
 Frame = +1

Query: 13  SFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLG 192
           +F +   + V+  G +P+HIAFIMDGNRRYAK  S+ + +GH  GF  L  +L +C ++G
Sbjct: 69  NFIRKCIVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRMGFSALIASLLYCYEMG 128

Query: 193 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 303
           +  +TVYAFSI+NFKR   EV +LMEL  EK   LL+
Sbjct: 129 VKYITVYAFSIDNFKRDLTEVKSLMELMEEKINELLE 165


>06_01_0477 + 3404648-3404657,3405385-3405461,3405638-3406501
          Length = 316

 Score =  106 bits (255), Expect = 9e-24
 Identities = 48/97 (49%), Positives = 66/97 (68%)
 Frame = +1

Query: 13  SFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLG 192
           +F +   + V+  G +P+HIAFIMDGNRRYAK  S+ + +GH  GF  L  +L +C ++G
Sbjct: 50  NFIRKCIVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRVGFSALIASLLYCYEMG 109

Query: 193 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 303
           +  +TVYAFSI+NFKR   EV +LMEL  EK   LL+
Sbjct: 110 VKYITVYAFSIDNFKRDPTEVKSLMELMEEKINELLE 146


>01_06_1398 - 37027659-37028112,37028393-37028460,37028543-37028908
          Length = 295

 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = +1

Query: 43  IKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFS 222
           ++   +P+H+A +MDGN R+A+   +  + GH  G   L ET++     GI  +T +AFS
Sbjct: 55  LRAESLPRHVAVVMDGNARWARARGLPSAAGHEAGRRALEETVRLSRAWGIRALTAFAFS 114

Query: 223 IENFKRSKEEVDALMEL 273
            EN+ R K EVD LM L
Sbjct: 115 NENWSRPKVEVDFLMRL 131


>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
          Length = 958

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 220  SIENFKRSKEEVDALMELAREKFQNLL 300
            ++EN  ++KE++D  M  +REK   L+
Sbjct: 921  TVENTPQTKEKIDIYMSYSREKLNKLV 947


>01_05_0264 +
           20168409-20168593,20168726-20169055,20170142-20170670,
           20170825-20170958,20171080-20171252,20171274-20171840,
           20172487-20172716,20172954-20172995,20173096-20173224
          Length = 772

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 263 LWNWLEKNSKISWMKCKY 316
           +W WL    K+ WM+C +
Sbjct: 567 VWKWLTTYHKLKWMRCGF 584


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,093,973
Number of Sequences: 37544
Number of extensions: 219057
Number of successful extensions: 456
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)