Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F05f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   4.7  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.2  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.2  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 267 GIGSRKIPKSLG*NVNININLFIHHQGYSGG 359
           GIGS  +   LG N N++ +   HH G +GG
Sbjct: 107 GIGSGAL--HLGQNPNLHHHHHHHHHGNNGG 135


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +1

Query: 178 CLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDEM 309
           C +LGI  ++  + ++ N +R  E+      L   +FQ ++  M
Sbjct: 118 CKELGIEVISAASHTLYNLERIIEKNGGRAPLTYHQFQAIIASM 161


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +1

Query: 151 DKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDEM 309
           ++LSE  KW       E  +Y   ++  ++  EE+D   + + +K   L  E+
Sbjct: 208 EELSEYQKWDKARRTLEYVIYETELKETRKQLEELDGQRKSSGDKQLLLTQEI 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,583
Number of Sequences: 2352
Number of extensions: 10630
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)