SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F05f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069247-1|AAL39392.1|  300|Drosophila melanogaster GM02310p pro...   126   2e-29
AE014298-1088|AAF46296.2|  300|Drosophila melanogaster CG10778-P...   126   2e-29
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    32   0.54 
DQ431010-1|ABD85475.1|  470|Drosophila melanogaster male germlin...    28   6.7  
AE014134-2953|AAN11009.1|  838|Drosophila melanogaster CG31791-P...    28   6.7  

>AY069247-1|AAL39392.1|  300|Drosophila melanogaster GM02310p
           protein.
          Length = 300

 Score =  126 bits (304), Expect = 2e-29
 Identities = 52/85 (61%), Positives = 68/85 (80%)
 Frame = +1

Query: 52  GRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIEN 231
           G +P H+AF+MDGNRR+A+   +DK  GH +GF+KL++ L+WCLD+G+ EVT +AFSIEN
Sbjct: 24  GYIPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIEN 83

Query: 232 FKRSKEEVDALMELAREKFQNLLDE 306
           FKRS EEV+ L  LAREKF  LL+E
Sbjct: 84  FKRSNEEVEGLFNLAREKFARLLEE 108


>AE014298-1088|AAF46296.2|  300|Drosophila melanogaster CG10778-PA
           protein.
          Length = 300

 Score =  126 bits (304), Expect = 2e-29
 Identities = 52/85 (61%), Positives = 68/85 (80%)
 Frame = +1

Query: 52  GRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIEN 231
           G +P H+AF+MDGNRR+A+   +DK  GH +GF+KL++ L+WCLD+G+ EVT +AFSIEN
Sbjct: 24  GYIPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIEN 83

Query: 232 FKRSKEEVDALMELAREKFQNLLDE 306
           FKRS EEV+ L  LAREKF  LL+E
Sbjct: 84  FKRSNEEVEGLFNLAREKFARLLEE 108


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
            protein.
          Length = 1489

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +1

Query: 79   IMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIEN-FKRSKEEV 255
            I+D      +KN   K T H+   D   E LK  L+  + EV + +    N FK   E +
Sbjct: 1067 IVDHQMEKLEKNCEQKETAHNNDLDLTDEDLKEFLEPMVEEVELMSQKKANDFKDFLEPM 1126

Query: 256  DALMELAREKFQNLL 300
               +EL  ++ +N+L
Sbjct: 1127 PEELELMSQQKKNIL 1141


>DQ431010-1|ABD85475.1|  470|Drosophila melanogaster male germline
           specific protein protein.
          Length = 470

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 163 ETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNL 297
           + LK+C DLG  E+ +Y    E+++  ++     MEL R    N+
Sbjct: 194 DCLKFCKDLGQIELLIYEIR-EDYRNDRDLCQGSMELLRSAQYNI 237


>AE014134-2953|AAN11009.1|  838|Drosophila melanogaster CG31791-PA
           protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 163 ETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNL 297
           + LK+C DLG  E+ +Y    E+++  ++     MEL R    N+
Sbjct: 194 DCLKFCKDLGQIELLIYEIR-EDYRNDRDLCQGSMELLRSAQYNI 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,869,188
Number of Sequences: 53049
Number of extensions: 389100
Number of successful extensions: 882
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -