Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3588|AAM68246.1|   87|Drosophila melanogaster CG13551-P...    61   8e-10
AE013599-3587|AAF46991.2|  107|Drosophila melanogaster CG13551-P...    61   8e-10
AE013599-3586|AAM68245.1|  107|Drosophila melanogaster CG13551-P...    61   8e-10
AY071315-1|AAL48937.1|  109|Drosophila melanogaster RE33866p pro...    52   4e-07
AE013599-3580|AAF46987.1|  318|Drosophila melanogaster CG11079-P...    40   0.002

>AE013599-3588|AAM68246.1|   87|Drosophila melanogaster CG13551-PC,
           isoform C protein.
          Length = 87

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = +1

Query: 220 KMEAAXEDEYFYKKQKEQLANLXGHLNKEIAFHQEQIKRXEDAIRRHXEQMSDXEK 387
           K+EAA E+EYFYKKQ+EQL  L      +  FH +QIK  E+AI+RH E + +  K
Sbjct: 32  KLEAAREEEYFYKKQREQLDRLKNDQIHQAEFHHQQIKEHEEAIQRHKEFLENLHK 87


>AE013599-3587|AAF46991.2|  107|Drosophila melanogaster CG13551-PB,
           isoform B protein.
          Length = 107

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = +1

Query: 220 KMEAAXEDEYFYKKQKEQLANLXGHLNKEIAFHQEQIKRXEDAIRRHXEQMSDXEK 387
           K+EAA E+EYFYKKQ+EQL  L      +  FH +QIK  E+AI+RH E + +  K
Sbjct: 52  KLEAAREEEYFYKKQREQLDRLKNDQIHQAEFHHQQIKEHEEAIQRHKEFLENLHK 107


>AE013599-3586|AAM68245.1|  107|Drosophila melanogaster CG13551-PA,
           isoform A protein.
          Length = 107

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = +1

Query: 220 KMEAAXEDEYFYKKQKEQLANLXGHLNKEIAFHQEQIKRXEDAIRRHXEQMSDXEK 387
           K+EAA E+EYFYKKQ+EQL  L      +  FH +QIK  E+AI+RH E + +  K
Sbjct: 52  KLEAAREEEYFYKKQREQLDRLKNDQIHQAEFHHQQIKEHEEAIQRHKEFLENLHK 107


>AY071315-1|AAL48937.1|  109|Drosophila melanogaster RE33866p
           protein.
          Length = 109

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = +1

Query: 220 KMEAAXEDEYFYKKQKEQLANLXGHLNKEIAFHQEQIKRXEDAI 351
           K+EAA E+EYFYKKQ+EQL  L      +  FH +QIK  E+AI
Sbjct: 52  KLEAAREEEYFYKKQREQLDRLKNDQIHQAEFHHQQIKEHEEAI 95


>AE013599-3580|AAF46987.1|  318|Drosophila melanogaster CG11079-PA,
           isoform A protein.
          Length = 318

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +1

Query: 220 KMEAAXEDEYFYKKQKEQLANL 285
           KMEAA E+E+FYK+QKEQL NL
Sbjct: 30  KMEAAREEEFFYKQQKEQLKNL 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,269,196
Number of Sequences: 53049
Number of extensions: 217237
Number of successful extensions: 438
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)