Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF326939-1|AAG49389.1|  109|Caenorhabditis elegans mitochondrial...    63   1e-10
AF038604-5|AAB92010.1|  109|Caenorhabditis elegans Hypothetical ...    63   1e-10
U49941-7|AAB53875.1|   88|Caenorhabditis elegans Mitochondrial a...    45   4e-05
L12348-1|AAA28107.1|   88|Caenorhabditis elegans ATPase inhibito...    45   4e-05
U00066-1|AAA50742.1|  490|Caenorhabditis elegans High incidence ...    29   1.5  
Z68003-4|CAA91978.2|  277|Caenorhabditis elegans Hypothetical pr...    28   4.7  

>AF326939-1|AAG49389.1|  109|Caenorhabditis elegans mitochondrial
           ATPase inhibitor protein.
          Length = 109

 Score = 62.9 bits (146), Expect = 1e-10
 Identities = 26/55 (47%), Positives = 38/55 (69%)
 Frame = +1

Query: 220 KMEAAXEDEYFYKKQKEQLANLXGHLNKEIAFHQEQIKRXEDAIRRHXEQMSDXE 384
           KMEAA EDEYFYKKQK QL  L  H+ +E+  H+ Q++  +  + RH +++S+ E
Sbjct: 46  KMEAAREDEYFYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQRISEIE 100


>AF038604-5|AAB92010.1|  109|Caenorhabditis elegans Hypothetical
           protein B0546.1 protein.
          Length = 109

 Score = 62.9 bits (146), Expect = 1e-10
 Identities = 26/55 (47%), Positives = 38/55 (69%)
 Frame = +1

Query: 220 KMEAAXEDEYFYKKQKEQLANLXGHLNKEIAFHQEQIKRXEDAIRRHXEQMSDXE 384
           KMEAA EDEYFYKKQK QL  L  H+ +E+  H+ Q++  +  + RH +++S+ E
Sbjct: 46  KMEAAREDEYFYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQRISEIE 100


>U49941-7|AAB53875.1|   88|Caenorhabditis elegans Mitochondrial
           atpase inhibitorfamily protein 1 protein.
          Length = 88

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 19/55 (34%), Positives = 34/55 (61%)
 Frame = +1

Query: 223 MEAAXEDEYFYKKQKEQLANLXGHLNKEIAFHQEQIKRXEDAIRRHXEQMSDXEK 387
           M A  E+EYF ++QK+QL NL   L  ++   Q++I+  E  + +H +++ + EK
Sbjct: 30  MGATREEEYFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQRLKEIEK 84


>L12348-1|AAA28107.1|   88|Caenorhabditis elegans ATPase inhibitor
           protein.
          Length = 88

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 19/55 (34%), Positives = 34/55 (61%)
 Frame = +1

Query: 223 MEAAXEDEYFYKKQKEQLANLXGHLNKEIAFHQEQIKRXEDAIRRHXEQMSDXEK 387
           M A  E+EYF ++QK+QL NL   L  ++   Q++I+  E  + +H +++ + EK
Sbjct: 30  MGATREEEYFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQRLKEIEK 84


>U00066-1|AAA50742.1|  490|Caenorhabditis elegans High incidence of
           males (increasedx chromosome loss) protein 10 protein.
          Length = 490

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 292 HLNKEIAFHQEQIKRXEDAIRRHXEQMSD 378
           HLN+E+    EQ+K+  +  +RH E++ D
Sbjct: 237 HLNEEVLTSPEQLKQEMEERKRHIEELRD 265


>Z68003-4|CAA91978.2|  277|Caenorhabditis elegans Hypothetical
           protein E02H4.5 protein.
          Length = 277

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 359 TKNKCLTLKSPXELDIDSDSXRRPKN 436
           +K+KC +LK   +L++ S S + P+N
Sbjct: 71  SKSKCASLKEQTDLNVQSHSQKLPRN 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,120,474
Number of Sequences: 27780
Number of extensions: 119444
Number of successful extensions: 296
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)