Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    26   0.20 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   0.62 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   5.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.8  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   7.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   7.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   7.7  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 11  RKSLNNLEKSQRILIQFKHYRKS*ISFPKQERHSCVLSS 127
           RKS NNL  S +++ ++KH       F   ER    + S
Sbjct: 27  RKSANNLAHSMKVIYEWKHID---FDFGSDERRDAAIKS 62


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 310 AFHQEQIKRXEDAIRRHXEQMSD 378
           A H+EQ+ R +  +RR  EQ+++
Sbjct: 108 AVHKEQLSREQRFLRRRLEQLTN 130


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
          protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 2  ILDRKSLNNLEKSQRILIQFKH 67
          I  RKS  NLE S  ++ ++K+
Sbjct: 22 IHQRKSSKNLEHSMNVIHEWKY 43


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 292  HLNKEIAFHQEQIKRXEDAI 351
            ++NK    H+ Q+K  +D I
Sbjct: 1682 NVNKHCTIHRTQVKETDDKI 1701


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 162 SRSRFACIHSNVDDSTHE*RSCF 94
           S  R +  HS  +DS HE R+ +
Sbjct: 223 SFQRTSSCHSRYEDSRHEDRNSY 245


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 162 SRSRFACIHSNVDDSTHE*RSCF 94
           S  R +  HS  +DS HE R+ +
Sbjct: 223 SFQRTSSCHSRYEDSRHEDRNSY 245


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 162 SRSRFACIHSNVDDSTHE*RSCF 94
           S  R +  HS  +DS HE R+ +
Sbjct: 223 SFQRTSSCHSRYEDSRHEDRNSY 245


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 162 SRSRFACIHSNVDDSTHE*RSCF 94
           S  R +  HS  +DS HE R+ +
Sbjct: 223 SFQRTSSCHSRYEDSRHEDRNSY 245


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 162 SRSRFACIHSNVDDSTHE*RSCF 94
           S  R +  HS  +DS HE R+ +
Sbjct: 223 SFQRTSSCHSRYEDSRHEDRNSY 245


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 162 SRSRFACIHSNVDDSTHE*RSCF 94
           S  R +  HS  +DS HE R+ +
Sbjct: 223 SFQRTSSCHSRYEDSRHEDRNSY 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,005
Number of Sequences: 438
Number of extensions: 1427
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)