Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F03f
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.64 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 105 PHGSTFRLGADSGRFSQCCSRPPCEQR 185
           P+G T   G D G +   CS  PCE +
Sbjct: 88  PYGYT---GKDCGEYVDWCSTNPCENQ 111


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 253 KDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYA 408
           KD ++   D++   P+   + +  G   V G+ EEK  ++  +    TRR A
Sbjct: 83  KDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRRLA 134


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 77  LITKLSVLVASWINISAWG*LRKIFSVL 160
           ++  LSV+ +S+++I+ W  L K F  +
Sbjct: 484 VLNLLSVIKSSFLDINTWKMLVKSFDAI 511


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +3

Query: 321 GRLHRG*RQTRGEERSAWLHIASIHSSLRFAGGLY 425
           G  H G  ++     +AW  + S  S L  +GG++
Sbjct: 172 GATHHGGIKSDSVTSNAWWDVHSTGSWLDMSGGMH 206


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 395 LVATLCRRAVRLNLWSPGC 451
           LV  L +  + +++WSP C
Sbjct: 222 LVWLLSQAWISVHIWSPNC 240


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 395 LVATLCRRAVRLNLWSPGC 451
           LV  L +  + +++WSP C
Sbjct: 455 LVWLLSQAWISVHIWSPNC 473


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 395 LVATLCRRAVRLNLWSPGC 451
           LV  L +  + +++WSP C
Sbjct: 455 LVWLLSQAWISVHIWSPNC 473


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 381 YVTMLIFLLLVF 346
           Y T  IFLLL+F
Sbjct: 244 YTTYTIFLLLIF 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,711
Number of Sequences: 336
Number of extensions: 2628
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)