Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302F03f
(489 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0478 + 8775892-8776377 36 0.013
03_02_0485 - 8808139-8808618 36 0.017
03_02_0484 + 8805053-8805538 36 0.023
03_02_0483 - 8804021-8804485 36 0.023
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 35 0.040
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 34 0.053
01_01_0229 - 1943473-1943922 34 0.053
01_01_0231 + 1951047-1951499 34 0.070
05_03_0545 - 15244647-15245147,15245342-15245635 31 0.38
01_01_0227 + 1933247-1933699 31 0.38
07_01_1127 + 10456895-10457388,10457488-10458112 29 2.0
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 29 2.6
09_04_0139 + 15030753-15031208,15031298-15031523,15031599-150319... 29 2.6
09_03_0036 + 11772940-11773171,11774995-11775104 29 2.6
04_01_0252 - 3329712-3331061 29 2.6
03_01_0491 + 3720842-3720958,3721904-3723109 28 3.5
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 28 4.6
04_01_0106 + 1102880-1105691,1105781-1105806 28 4.6
02_02_0489 + 10869482-10871218 28 4.6
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 27 6.1
06_03_1505 + 30635572-30635802,30636977-30637135,30637217-306373... 27 6.1
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 27 8.1
05_01_0238 - 1783742-1783780,1783838-1783936,1784033-1784155 27 8.1
04_03_0801 - 19828175-19828770,19828913-19828994 27 8.1
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228... 27 8.1
01_07_0105 - 41104655-41104851,41105818-41107150 27 8.1
>03_02_0478 + 8775892-8776377
Length = 161
Score = 36.3 bits (80), Expect = 0.013
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 277 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 432
DV EE+ V+ DG I+ + G+ EEK DQ + R +F RR+ LP+ E
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 433 SVESRLSSDGVLSXIAP 483
+++ + +GVL+ P
Sbjct: 130 QIKASM-ENGVLTVTVP 145
>03_02_0485 - 8808139-8808618
Length = 159
Score = 35.9 bits (79), Expect = 0.017
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 277 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 432
DV EE+ V+ DG I+ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 433 SVESRLSSDGVLSXIAP 483
+++ + +GVL+ P
Sbjct: 128 QIKASM-ENGVLTVTVP 143
>03_02_0484 + 8805053-8805538
Length = 161
Score = 35.5 bits (78), Expect = 0.023
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 277 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 432
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 433 SVESRLSSDGVLSXIAP 483
+++ + +GVL+ P
Sbjct: 130 QIKASM-ENGVLTVTVP 145
>03_02_0483 - 8804021-8804485
Length = 154
Score = 35.5 bits (78), Expect = 0.023
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 277 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 432
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 433 SVESRLSSDGVLSXIAP 483
+++ + +GVL+ P
Sbjct: 123 QIKASM-ENGVLTVTVP 138
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 34.7 bits (76), Expect = 0.040
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 277 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 432
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 433 SVESRLSSDGVLSXIAP 483
V++ L +GVL+ P
Sbjct: 119 QVKAGL-ENGVLTVTVP 134
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 34.3 bits (75), Expect = 0.053
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Frame = +1
Query: 196 PWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQ-- 369
P R LA + + D + ++ D+ + EE+ V D +V+ G+H++++ +
Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181
Query: 370 ----HGYISRQ----FTRRYALPEGCTAESVESRLSSDGVLSXIAP 483
G+ + + R ALP+ C V + L +GVL P
Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVP 226
>01_01_0229 - 1943473-1943922
Length = 149
Score = 34.3 bits (75), Expect = 0.053
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 277 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 432
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 433 SVESRLSSDGVLSXIAP 483
V++ + +GVL+ P
Sbjct: 118 QVKASM-ENGVLTVTVP 133
>01_01_0231 + 1951047-1951499
Length = 150
Score = 33.9 bits (74), Expect = 0.070
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 277 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 432
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 433 SVESRLSSDGVLSXIAP 483
V++ + +GVL+ P
Sbjct: 119 QVKAGM-ENGVLTVTVP 134
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 31.5 bits (68), Expect = 0.38
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 352 RVCLQPRCSRPPF*QRFLPGRNAGR 278
R CLQPR SRPP ++F GR+ R
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGRHPNR 245
>01_01_0227 + 1933247-1933699
Length = 150
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 337 VEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSXIAP 483
V+GK++E+ S +F RR+ LP G + V + + +GVL+ P
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVP 134
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 352 RVCLQPRCSRPPF*QRFLPGRNAGR 278
R CLQPR SRPP ++F R+ R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSRHPNR 353
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 299 KKSLLKRRTATSWLKANTRRRKISMVTYRVNS 394
KKS T TS K TRRRK+++V Y S
Sbjct: 16 KKSAAGELTTTSEKKKKTRRRKVAVVYYLCRS 47
>09_04_0139 +
15030753-15031208,15031298-15031523,15031599-15031981,
15032353-15032685,15032902-15033010,15033089-15033465
Length = 627
Score = 28.7 bits (61), Expect = 2.6
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Frame = +1
Query: 103 RLMDQHFGLGLTPEDFLSAAAGPLVSREYYRPWRHLAAAARDLG--SSIKSDKDKFQVNL 276
+ ++ HF + LT + + + R W+ + DL S+ SD D F ++L
Sbjct: 407 KALNDHFNINLTSDQITN----------HIRTWKRKYSKIADLRKLSAALSDDDNFIISL 456
Query: 277 DVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSS 456
D +H+A + I AD + + H K + + T +YA + S L+
Sbjct: 457 DHKHYA-DHIKDHKADAEYLNKPIHNYSKMLVIFGNSLATGKYAKGSATGSASRVHALNE 515
Query: 457 DGVLSXIAP 483
+ S AP
Sbjct: 516 ENGASSSAP 524
>09_03_0036 + 11772940-11773171,11774995-11775104
Length = 113
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 297 GRNLC*NGGRLHRG*RQTRGEERSAWLH 380
G+NL G+ H G R+ RG+ER LH
Sbjct: 21 GQNLMDRRGKRHEGRRERRGKERGRNLH 48
>04_01_0252 - 3329712-3331061
Length = 449
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 352 RVCLQPRCSRPPF*QRFLPGRNAGR 278
R CLQPR +RPP ++F R++ R
Sbjct: 406 RDCLQPRQNRPPHYRQFTRSRHSNR 430
>03_01_0491 + 3720842-3720958,3721904-3723109
Length = 440
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 180 AHKGAGCSTEKIFRSQPQAEMLIHEATRTLNFV 82
A G GC K+F S+ +A+ H A +L F+
Sbjct: 391 ADHGRGCKLAKVFESKDEAKASTHTAISSLPFM 423
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 244 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 417
+SDKDK N+D + A E + V+ E K +EK + H Y + R L E
Sbjct: 502 ESDKDKIMCNVDEKDIA-EHLRVRLKKEQEEKEHKKKEKAEAHLYTIIKVARDENLKE 558
>04_01_0106 + 1102880-1105691,1105781-1105806
Length = 945
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 199 WRHLAAAARDLGSSIKSDKD-KFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEK 360
W+ LAA ++ + +++ ++ K Q N+D+ +P I + + + + KH K
Sbjct: 119 WQRLAAELKEAQNRLQNLRNLKVQYNIDLSEESPSSIRYEDSQVHTIQHIKHNNK 173
>02_02_0489 + 10869482-10871218
Length = 578
Score = 27.9 bits (59), Expect = 4.6
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 196 PWRHLAAAARDLGSSIKSDK---DKFQVNLDVQHFAPEEISVKTADGYIVVEGK-HEEKK 363
P AA D G+ + S K D +++ D P+E + T +G I+ G+ H+EK
Sbjct: 430 PKEATTTAASDDGTLVGSKKGKADNGKLDGDTHSVMPKEATAGTQNGGILTGGENHKEKV 489
Query: 364 DQHGYISRQFTRRYA 408
D+ + R YA
Sbjct: 490 DKDANVP-SIRREYA 503
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 244 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 417
+SDKDK N+D + A E + ++ E K +EK + H Y + R L E
Sbjct: 488 ESDKDKIMCNVDEKDIA-EHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKE 544
>06_03_1505 +
30635572-30635802,30636977-30637135,30637217-30637328,
30638004-30638123,30638264-30638415,30638938-30638972,
30639077-30639233,30639328-30639381,30639502-30639594,
30639685-30639827,30639939-30640009,30640323-30640453
Length = 485
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 368 SMVTYRVNSLVATLCRRAVRLNLWSPGCLQMVCCLXSHQE 487
SMV Y +L++ +R NLWS G + VC H +
Sbjct: 436 SMVAYGSGALISLGWKRGELWNLWSKGEPERVCPHHMHMQ 475
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 466 THHLKTAGTPQIQPYSPPAKRS 401
THHL+ P++ Y+PPAKR+
Sbjct: 755 THHLENL--PEVFKYAPPAKRT 774
>05_01_0238 - 1783742-1783780,1783838-1783936,1784033-1784155
Length = 86
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 168 PPCEQRILPPVASPCCRGSR 227
PPC R+L PVAS RG R
Sbjct: 6 PPCLLRVLLPVASSSSRGLR 25
>04_03_0801 - 19828175-19828770,19828913-19828994
Length = 225
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 129 GADSGRFSQCCSRPPCE-QRILPPVASPCCRG 221
G G CCS PPC Q + PP PC G
Sbjct: 182 GGGGGCKKPCCSPPPCPWQPVCPP--PPCGGG 211
>03_06_0123 -
31821915-31822094,31822187-31822324,31822413-31822817,
31822897-31823212,31823305-31823543,31823800-31823903,
31823987-31824145,31824326-31824510,31825318-31825427,
31826900-31826947,31827047-31827241,31827354-31827422,
31829521-31829620,31829879-31829940
Length = 769
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 163 AGPLVSREYYRPWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTAD 324
AG ++ Y+ W A A L + + ++ VN+D + +P +V T D
Sbjct: 256 AGGGIASTAYKKWERDAMAGVSLVADAAEELERNTVNVDARTLSPSSNNVCTVD 309
>01_07_0105 - 41104655-41104851,41105818-41107150
Length = 509
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 250 DKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISR 387
D K N++ + EEI V+ + I+V + EE++++ ISR
Sbjct: 360 DAKKETSNIEAINVEQEEIKVEEEEEKIIVSQETEEEEEKSAVISR 405
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,380,531
Number of Sequences: 37544
Number of extensions: 336678
Number of successful extensions: 966
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -