Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302F02f
(470 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein. 38 0.018
M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein. 38 0.018
BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha) p... 38 0.018
AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha stria... 38 0.018
AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin ... 38 0.018
AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens ... 38 0.018
X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for ... 38 0.023
X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal ... 38 0.023
M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein. 38 0.023
BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein. 38 0.023
BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein. 38 0.023
BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein. 38 0.023
AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein. 38 0.023
AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein. 38 0.023
AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein. 38 0.023
AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein. 38 0.023
AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 38 0.023
AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens ... 38 0.023
AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein. 38 0.023
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 33 0.38
U77783-1|AAC15910.1| 1336|Homo sapiens N-methyl-D-aspartate rece... 33 0.50
AB209292-1|BAD92529.1| 610|Homo sapiens N-methyl-D-aspartate re... 33 0.50
AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens ... 33 0.66
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 32 0.87
AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein. 32 0.87
AK124627-1|BAC85906.1| 175|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens ... 30 3.5
M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel al... 30 4.6
M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel al... 30 4.6
AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel, voltag... 30 4.6
AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel, voltag... 30 4.6
AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel, voltag... 30 4.6
AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel, voltag... 30 4.6
AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel, voltag... 30 4.6
AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel, voltag... 30 4.6
AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel, voltag... 30 4.6
AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel, voltag... 30 4.6
AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens ... 29 6.1
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 29 6.1
X76785-2|CAA54180.1| 342|Homo sapiens hypothetical protein prot... 29 8.1
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 29 8.1
>M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein.
Length = 264
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 224 RSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 261
>M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein.
Length = 284
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 244 RSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 281
>BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 284
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 244 RSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 281
>AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha striated
muscle isoform protein.
Length = 284
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 244 RSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 281
>AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin
kappa protein.
Length = 284
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 244 RSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 281
>AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ26372 fis, clone HRT06233. ).
Length = 217
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 177 RSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 214
>X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for
skeletal beta-tropomyosin. ).
Length = 284
Score = 37.5 bits (83), Expect = 0.023
Identities = 14/38 (36%), Positives = 28/38 (73%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDE+ K +YK++++E+D+ ++
Sbjct: 244 RSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDI 281
>X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal
muscle 1.3 kb mRNA for tropomyosin. ).
Length = 285
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 245 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 282
>M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein.
Length = 131
Score = 37.5 bits (83), Expect = 0.023
Identities = 14/38 (36%), Positives = 28/38 (73%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDE+ K +YK++++E+D+ ++
Sbjct: 91 RSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDI 128
>BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein.
Length = 158
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 118 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 155
>BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 245 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 282
>BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 245 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 282
>AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein.
Length = 284
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 244 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 281
>AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein.
Length = 242
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 202 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 239
>AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 208 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 245
>AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 118 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 155
>AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 37.5 bits (83), Expect = 0.023
Identities = 14/38 (36%), Positives = 28/38 (73%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDE+ K +YK++++E+D+ ++
Sbjct: 244 RSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDI 281
>AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ35371 fis, clone SKMUS2001740, highly similar to
TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE TYPE. ).
Length = 243
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 203 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 240
>AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein.
Length = 247
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 248
++V KL+K +D LEDEL K +YK++++E+D ++
Sbjct: 208 RSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 245
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 33.5 bits (73), Expect = 0.38
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 231 SHSTYRPQTHTNRTCTHTYAAPLPHTHKHMYIN---YTTTRIHVYT 103
+H P TH + TCTH ++ +TH H +I+ +T T H YT
Sbjct: 267 THMDTYPHTHIH-TCTHMHSHAHINTHTHAHIHMHMHTHTHTHTYT 311
Score = 32.7 bits (71), Expect = 0.66
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = -3
Query: 204 HTNRTCTH----TYAAPLPHTHKHMYIN-YTTTRIHVYT 103
HT+ TCTH TY HTH H+Y + +T T IH+++
Sbjct: 128 HTH-TCTHIYTCTYTVVCTHTHMHIYTHMHTHTCIHIHS 165
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Frame = -3
Query: 231 SHSTYRPQTHTN---RTCTHTYAAPLPHTHKHMYIN-----YTTTRIHVYT 103
SH+ TH + THT+ H H H++IN YT T I YT
Sbjct: 285 SHAHINTHTHAHIHMHMHTHTHTHTYTHAHAHIHINTYMHTYTYTHIRTYT 335
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 207 THTNRTCTHTYAAPLPHTHKHMYI-NYTTTRIHVYT 103
THT TCT T HTH H+++ +T T H++T
Sbjct: 173 THT-LTCTQTQIHTCTHTHIHIHMPTHTRTYTHMHT 207
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 240 TKLSHSTYRPQTHTNRTCTHTYAAPLPHTHKHMYIN-YTTTRIHVYT*CNNIY 85
T + TY+ TH + HTH H++I+ + IH +T C +IY
Sbjct: 85 THIHTCTYKRTYIQGHIHTHMHTYTHAHTHAHIHIHVHIHMNIHTHT-CTHIY 136
>U77783-1|AAC15910.1| 1336|Homo sapiens N-methyl-D-aspartate receptor
2D subunit precursor protein.
Length = 1336
Score = 33.1 bits (72), Expect = 0.50
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = -3
Query: 270 WIPPSPSWLVTKLSHSTYR---PQTHTNRT-CTH-TYAAPLPHTHKH 145
W PP P W L R P++H +R +H T AA PH H+H
Sbjct: 1207 WAPPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRTPAAAAPHHHRH 1253
>AB209292-1|BAD92529.1| 610|Homo sapiens N-methyl-D-aspartate
receptor subunit 2D precursor variant protein.
Length = 610
Score = 33.1 bits (72), Expect = 0.50
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = -3
Query: 270 WIPPSPSWLVTKLSHSTYR---PQTHTNRT-CTH-TYAAPLPHTHKH 145
W PP P W L R P++H +R +H T AA PH H+H
Sbjct: 481 WAPPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRTPAAAAPHHHRH 527
>AK057435-1|BAB71485.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ32873 fis, clone TESTI2003998, weakly similar to
T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 170
Score = 32.7 bits (71), Expect = 0.66
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -3
Query: 231 SHSTYRPQTHTNRTCTHTYAAPLPHTHKH---MYINYTTTRIHVYT*CN 94
SH+ QT T TCTHT+ + H H H YTT H +T N
Sbjct: 87 SHTHAHTQTWTY-TCTHTHTHAVTHVHMHAGTQTRTYTTLHKHAHTDTN 134
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 32.3 bits (70), Expect = 0.87
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 192 TCTHTYAAPLPHTHKHMYIN-YTTTRIHVYT 103
T HTY HTHKH++ + + T H+YT
Sbjct: 109 THMHTYTCTCTHTHKHIHAHIHIHTHTHIYT 139
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 231 SHSTYRPQTHT-NRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 103
+H+ R HT T TH + L +TH HM +T T+ H+YT
Sbjct: 13 THAHIRTCIHTCTDTHTHMHTHTLTYTHIHM---HTHTQTHIYT 53
>AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein.
Length = 203
Score = 32.3 bits (70), Expect = 0.87
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = -2
Query: 361 KTVKKLQKEVDRLEDELGINKDRYKSLAD 275
++V KL+K +D LEDEL K +YK++++
Sbjct: 175 RSVTKLEKSIDDLEDELYAQKLKYKAISE 203
>AK124627-1|BAC85906.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ42636 fis, clone BRACE3023912. ).
Length = 175
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 195 RTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 103
RTCTHT+A L H H Y TR++ T
Sbjct: 32 RTCTHTHAQALMHRCTHTQGMYLHTRVNTRT 62
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 222 TYRPQTHTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 103
TY T+ + T THT+ L H H Y TR+H +T
Sbjct: 135 TYAQCTYLH-TRTHTHTQALMHRCTHTQCTYLHTRVHAHT 173
Score = 29.5 bits (63), Expect = 6.1
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Frame = -3
Query: 330 TGSKTSSASTRIDTRAWLMRWIPPSPSWLVTKLSHSTYR---PQTHTNRTCT--HTYAAP 166
TG + T +A + R +L T+++ T + H+ TCT H +A
Sbjct: 26 TGHVPARTCTHTHAQALMHRCTHTQGMYLHTRVNTRTGTHADARIHSASTCTRVHIHAHA 85
Query: 165 LPHTHKHMYINYTTTRIHVYT 103
H H Y TR+H +T
Sbjct: 86 GTHAQMHTQCTYLHTRVHTHT 106
>AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ40133 fis, clone TESTI2012231. ).
Length = 225
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 240 TKLSHSTYRPQTHTNRTCTHTYAAPLPHTHKHMYINYTTTRIHV 109
T +H+T+ ++ + THT PL TH H + + T R H+
Sbjct: 44 THHTHTTHTTHINSYKAFTHTTHTPLTSTHLHTPLTH-TPRTHI 86
>M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel
alpha-1 subunit protein.
Length = 2237
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 883 EERPRPHRSHSKEAAGPPEARSERGRGP 910
>M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel
alpha-1 subunit protein.
Length = 2339
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 883 EERPRPHRSHSKEAAGPPEARSERGRGP 910
>AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel,
voltage-dependent, N type, alphar), member 6 protein.
Length = 2337
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 883 EERPRPHRSHSKEAAGPPEARSERGRGP 910
>AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel,
voltage-dependent, N type, alpha protein.
Length = 2339
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 883 EERPRPHRSHSKEAAGPPEARSERGRGP 910
>AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel,
voltage-dependent, N type, alpha protein.
Length = 2338
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 884 EERPRPHRSHSKEAAGPPEARSERGRGP 911
>AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel,
voltage-dependent, N type, alpha7a (RPL7A) protein.
Length = 2237
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 883 EERPRPHRSHSKEAAGPPEARSERGRGP 910
>AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel,
voltage-dependent, N type, alpha(TBP)-associated factor,
100kD protein.
Length = 2337
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 883 EERPRPHRSHSKEAAGPPEARSERGRGP 910
>AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel,
voltage-dependent, N type, alphabeta family protein.
Length = 2339
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 883 EERPRPHRSHSKEAAGPPEARSERGRGP 910
>AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel,
voltage-dependent, N type, alphaate 3A protein.
Length = 2338
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 884 EERPRPHRSHSKEAAGPPEARSERGRGP 911
>AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel,
voltage-dependent, N type, alpha, alpha protein.
Length = 2237
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 461 EEKGXPARRRVQEAAEDPDRQAEGGRGP 378
EE+ P R +EAA P+ ++E GRGP
Sbjct: 883 EERPRPHRSHSKEAAGPPEARSERGRGP 910
>AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ42813 fis, clone BRCAN2012355. ).
Length = 180
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 186 THTYAAPLPH--THKHMYINYTTTRIHVYT 103
TH Y H THKHMY+ YT ++ YT
Sbjct: 37 THRYMCTRKHMYTHKHMYV-YTYIYVYTYT 65
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 29.5 bits (63), Expect = 6.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 228 HSTYRPQTHTNRTCTHTYAAPLPHTHKHMYINYTT 124
HS P TH++ +HTY L H H H + + +T
Sbjct: 29 HSHTHPLTHSH-PLSHTYPLTLTHIHTHPHTHIST 62
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -3
Query: 231 SHSTYRPQTHTNR-TCTHTYAAPLPHTHKHMYIN---YTTTRIHVY 106
SH THT+ T TH + + HTH H + + YT T H +
Sbjct: 103 SHIHSNTPTHTHPLTSTHIQTSTVTHTHSHTHAHKHTYTHTSTHTH 148
>X76785-2|CAA54180.1| 342|Homo sapiens hypothetical protein
protein.
Length = 342
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 210 QTHTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVYT 103
QTHT H++ HTH H ++T + H++T
Sbjct: 116 QTHTTTIIQHSHTNTQKHTHAH---SHTLSHCHIHT 148
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 249 WLVTKLSHSTYRPQTHTNRTCTHTYAAP-LP-HTHKHMYINYTTTRIHVYT 103
WL++ H THT+ T THT+A LP HTH H + IH +T
Sbjct: 69 WLISLYIH------THTH-THTHTHAVLYLPTHTHTHAVLTLAYLPIHTHT 112
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,186,191
Number of Sequences: 237096
Number of extensions: 706479
Number of successful extensions: 2860
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2839
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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