Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302F01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    25   0.41 
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   2.2  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   3.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.6  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 248 GIFRVFSNFQVIHKCSVCITKFS 180
           G+ R     +V+H+C VC  KF+
Sbjct: 183 GVHRAKPPMRVLHQCPVCHKKFT 205


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
 Frame = +3

Query: 93  TLIDTLYDNRVRVVIAADSEPKNLMKLDETEFGDADR-------ALMDDLKITKDSEDAK 251
           TL+  L+   V VV AAD        +D  +   +DR        L+D  K + D ++ K
Sbjct: 3   TLVLVLFVAVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNYVNCLLDRGKCSPDGQELK 62

Query: 252 ATIFTGEEEMFACDRCLSR 308
             +   +    +C +C  R
Sbjct: 63  NNL--ADALQTSCSKCSQR 79


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = +3

Query: 261 FTGEEEMFACDRCLSRIMEMQTDEYWEKW 347
           FT  E ++A +      +    D+YW ++
Sbjct: 319 FTNSEGLYAINEIYDNALLALLDDYWNEY 347


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = +3

Query: 261 FTGEEEMFACDRCLSRIMEMQTDEYWEKW 347
           FT  E ++A +      +    D+YW ++
Sbjct: 319 FTNSEGLYAINEIYDNALLALLDDYWNEY 347


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +3

Query: 264 TGEEEMFACDRCLSRIMEMQTDEYWEKWGTHIN 362
           +G E     +RC SR+  +  +   E  G  +N
Sbjct: 806 SGSESSSISERCSSRVESLTPERKMEPPGVPLN 838


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,509
Number of Sequences: 336
Number of extensions: 2599
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)