Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.0  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   5.0  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 158 IWSYLKISILHISSTYQLVRRR 223
           I + L + ++HISS+ ++ RRR
Sbjct: 14  IVTLLVVLLVHISSSERVTRRR 35


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = -1

Query: 386 CQCSFRPECFAR*NLVK-CSCCRVSSVGRRT 297
           C+   +P        +K C CCR S +  RT
Sbjct: 63  CKSQVQPSVITPTGFLKECYCCRESFLRERT 93


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 109 QECGGGFTCKLEG 147
           +E  GGFTC   G
Sbjct: 149 EEVAGGFTCPAPG 161


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 109 QECGGGFTCKLEG 147
           +E  GGFTC   G
Sbjct: 149 EEVAGGFTCPAPG 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,932
Number of Sequences: 336
Number of extensions: 1997
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)